RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 EIF3EP60228 445 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 CSNK1G2P78368 415 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 IRF8Q02556 426 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 LIPEQ05469 1076 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 PDIA2Q13087 525 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 SELENBP1Q13228 472 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 MAB21L1Q13394 359 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ITIH4Q14624 930 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 SOHLH1Q5JUK2 328 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 C1orf146Q5VVC0 180 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 OLFML2AQ68BL7 652 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 HSD17B13Q7Z5P4 300 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 PRR22Q8IZ63 422 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 GABRG1Q8N1C3 465 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF525Q8N782 197 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 CCDC71LQ8N9Z2 235 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 FNDC5Q8NAU1 212 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 FAM184AQ8NB25 1140 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 OR10G3Q8NGC4 313 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 OR4A4PQ8NGN8 299 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ERMNQ8TAM6 284 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 MRAPQ8TCY5 172 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 OR1E3Q8WZA6 343 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ISG20Q96AZ6 181 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 HSFY1Q96LI6 401 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 FOXN4Q96NZ1 517 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 HIST1H4GQ99525 98 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 TSG101Q99816 390 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 SH3GL1Q99961 368 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 TMEM246Q9BRR3 403 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 LXNQ9BS40 222 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ANKRD60Q9BZ19 345 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 DNTTIP1Q9H147 329 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 PTGES2Q9H7Z7 377 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ISG20L2Q9H9L3 353 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 AHSPQ9NZD4 102 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 LSM7Q9UK45 103 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF256Q9Y2P7 627 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 N6AMT1Q9Y5N5 214 aa2.98□□□□□ -1.93
SNHG1-222ENST00000545308 PHF3Q92576 2039 aaKnown RBP2.98□□□□□ -1.93
SNHG1-222ENST00000545308 FLNCQ14315 2725 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 TMX2-CTNND1H3BSU7 103 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 I3L4J1 428 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 PPP1R2P9O14990 202 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF780AO75290 641 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 FGGP02679 453 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 C2P06681 752 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CLTAP09496 248 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 GABRG2P18507 467 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 STOMP27105 288 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 DCKP27707 260 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 GTF2E2P29084 291 aaKnown RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 BTCP35070 178 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 NAA10P41227 235 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CDKN1BP46527 198 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 UQCRFS1P47985 274 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 NPBWR2P48146 333 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 DIO3P55073 304 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 RAB10P61026 200 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 SELENOTP62341 195 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ACVR1Q04771 509 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 DOC2AQ14183 400 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 KRTAP21-3Q3LHN1 58 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 C1orf100Q5SVJ3 147 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 AGBL2Q5U5Z8 902 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 C9orf135Q5VTT2 229 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CRYBG3Q68DQ2 2970 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 C22orf42Q6IC83 251 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 REEP3Q6NUK4 255 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 TMIGD1Q6UXZ0 262 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 SSX9Q7RTT3 188 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 LHFPL3Q86UP9 236 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 BLIDQ8IZY5 108 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 PUSL1Q8N0Z8 303 aaKnown RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CEND1Q8N111 149 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 DEFB119Q8N690 84 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF557Q8N988 423 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 OR2G2Q8NGZ5 317 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 MARCH1Q8TCQ1 289 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CCDC126Q96EE4 140 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 PRRC1Q96M27 445 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ARHGDIGQ99819 225 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CNPY3Q9BT09 278 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 IQCGQ9H095 443 aaKnown RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 GBA3Q9H227 469 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 MRPS30Q9NP92 439 aaKnown RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 C20orf96Q9NUD7 363 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 GPATCH2LQ9NWQ4 482 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 QPCTLQ9NXS2 382 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 KCNIP1Q9NZI2 227 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ABCD2Q9UBJ2 740 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 ZNF107Q9UII5 783 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 NAP1L2Q9ULW6 460 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 SCML1Q9UN30 329 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 SVILO95425 2214 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 RAI1Q7Z5J4 1906 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CENPEQ02224 2701 aa2.97□□□□□ -1.93
SNHG1-222ENST00000545308 CELSR3Q9NYQ7 3312 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms