RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 NAA40Q86UY6 237 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ACBD7Q8N6N7 88 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 TBCCD1Q9NVR7 557 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MRPS18AQ9NVS2 196 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 N6AMT1Q9Y5N5 214 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ICMTO60725 284 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF254O75437 659 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KRT8P05787 483 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ANXA2P07355 339 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SLC2A1P11166 492 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ERVS71-1P61550 626 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 C6orf141Q5SZD1 244 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SPATA46Q5T0L3 261 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF544Q6NX49 715 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DEGS2Q6QHC5 323 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF679Q8IYX0 411 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR5L1Q8NGL2 311 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 TMEM171Q8WVE6 324 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 APOBEC3DQ96AK3 386 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 COG8Q96MW5 612 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DOK1Q99704 481 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 BRD7Q9NPI1 651 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SCN3BQ9NY72 215 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FZR1Q9UM11 496 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CMAHPQ9Y471 501 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RAI1Q7Z5J4 1906 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 EFCAB10A6NFE3 127 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 J3QRE1 110 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR4A8P0C604 315 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 TTKP33981 857 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SERPINF1P36955 418 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CSNK2BP67870 215 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ROM1Q03395 351 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF85Q03923 595 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 C20orf204Q6ZNR8 217 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FAM220AQ7Z4H9 259 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MUC15Q8N387 334 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 YIPF7Q8N8F6 280 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF540Q8NDQ6 660 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SLC25A40Q8TBP6 338 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 NRGNQ92686 78 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 GGHQ92820 318 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MRPL48Q96GC5 212 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MYCBPQ99417 103 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RHNO1Q9BSD3 238 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 C1QTNF5Q9BXJ0 243 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PLCXD1Q9NUJ7 323 aa12.47□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CRYBG3Q68DQ2 2970 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 J3QW42 95 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SLC1A7O00341 560 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TBX1O43435 398 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DENRO43583 198 aaKnown RBP12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 IGHA1P01876 353 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MYL12AP19105 171 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DCKP27707 260 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 GCH1P30793 250 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ACTA2P62736 377 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ACTG2P63267 376 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MED21Q13503 144 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ADIPOQQ15848 244 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ZNF829Q3KNS6 432 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ZNF718Q3SXZ3 478 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 AGAP6Q5VW22 663 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PLEKHG7Q6ZR37 379 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 AHSA2Q719I0 299 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 FAM57BQ71RH2 274 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TMEM80Q96HE8 168 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SYT3Q9BQG1 590 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ALG8Q9BVK2 526 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 LIME1Q9H400 295 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PLK3Q9H4B4 646 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SP140LQ9H930 580 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 INPP5EQ9NRR6 644 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PTTG3PQ9NZH4 202 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MRM2Q9UI43 246 aaKnown RBP12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PSORS1C1Q9UIG5 152 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DUSP13Q9UII6 198 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 GNG8Q9UK08 70 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 EDARQ9UNE0 448 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 LAMP3Q9UQV4 416 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 STARD10Q9Y365 291 aa12.46□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DSCAMO60469 2012 aa12.45□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TMEM269A0A1B0GVZ9 245 aa12.45□□□□□ -0.42
TNFRSF1A-216ENST00000543995 METTL15A6NJ78 407 aa12.45□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PTGES3LE9PB15 166 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms