RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 OR52N5Q8NH56 324 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 MITD1Q8WV92 249 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 FOXRED1Q96CU9 486 aaPredicted RBP18.13■□□□□ 0.49
TMEM260-203ENST00000539559 OR52A1Q9UKL2 312 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 SLC5A6Q9Y289 635 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 TRAV36DV7A0A075B6V5 113 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 IGKV1D-43A0A0B4J1Z2 117 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 SEMA4FO95754 770 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 PVALBP20472 110 aaPredicted RBP18.13■□□□□ 0.49
TMEM260-203ENST00000539559 YPEL5P62699 121 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 ROM1Q03395 351 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 SRSF4Q08170 494 aaKnown RBP18.13■□□□□ 0.49
TMEM260-203ENST00000539559 SCRN3Q0VDG4 424 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 AQP3Q92482 292 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 FOXQ1Q9C009 403 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 MKL2Q9ULH7 1088 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 CFAP54Q96N23 3096 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 TMEM269A0A1B0GVZ9 245 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 C2orf72A6NCS6 295 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 OR2T1O43869 369 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 CTSEP14091 401 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 NFYBP25208 207 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 LPCAT3Q6P1A2 487 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 MAMDC2Q7Z304 686 aaPredicted RBP18.12■□□□□ 0.49
TMEM260-203ENST00000539559 OR5T2Q8NGG2 359 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 PRRT1Q99946 306 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 NICN1Q9BSH3 213 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 CHMP1AQ9HD42 196 aaPredicted RBP18.12■□□□□ 0.49
TMEM260-203ENST00000539559 MYOZ1Q9NP98 299 aaPredicted RBP18.12■□□□□ 0.49
TMEM260-203ENST00000539559 TREM1Q9NP99 234 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 G6PC2Q9NQR9 355 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 PCDH15Q96QU1 1955 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 EFSO43281 561 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 NR0B1P51843 470 aaKnown RBP18.12■□□□□ 0.49
TMEM260-203ENST00000539559 FOXL2P58012 376 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 H3F3CQ6NXT2 135 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 CCDC36Q8IYA8 594 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 SVBPQ8N300 66 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 OR4A4PQ8NGN8 299 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 PIK3IP1Q96FE7 263 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 CCNL2Q96S94 520 aaPredicted RBP18.12■□□□□ 0.49
TMEM260-203ENST00000539559 C12orf57Q99622 126 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 SLC7A5P2Q9GIP4 190 aa18.12■□□□□ 0.49
TMEM260-203ENST00000539559 MSGN1A6NI15 193 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 TMEM200CA6NKL6 621 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 MBTPS2O43462 519 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 NSA2O95478 260 aaKnown RBP18.11■□□□□ 0.49
TMEM260-203ENST00000539559 CD1CP29017 333 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 TMEM151BQ8IW70 566 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 ARMC10Q8N2F6 343 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 OR4K17Q8NGC6 315 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 OR10R2Q8NGX6 335 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 PHYHIPLQ96FC7 376 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 SLCO5A1Q9H2Y9 848 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 OR2S2Q9NQN1 319 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 ZNF629Q9UEG4 869 aaPredicted RBP18.11■□□□□ 0.49
TMEM260-203ENST00000539559 KCNK7Q9Y2U2 307 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 R4GMQ9 66 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 H0YIZ8 118 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 ADAP1O75689 374 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 PPICP45877 212 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 PNLIPRP2P54317 469 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 SMAD4Q13485 552 aaKnown RBP18.11■□□□□ 0.49
TMEM260-203ENST00000539559 TOMM20Q15388 145 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 SMAD2Q15796 467 aaKnown RBP18.11■□□□□ 0.49
TMEM260-203ENST00000539559 CMSS1Q9BQ75 279 aaKnown RBP18.11■□□□□ 0.49
TMEM260-203ENST00000539559 LAT2Q9GZY6 243 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 SOHLH2Q9NX45 425 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 RHBDD3Q9Y3P4 386 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 HS3ST3A1Q9Y663 406 aa18.11■□□□□ 0.49
TMEM260-203ENST00000539559 HSPB2A8KAH6 182 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 SRSF10O75494 262 aaKnown RBP18.1■□□□□ 0.49
TMEM260-203ENST00000539559 IL12BP29460 328 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 GFERP55789 205 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 CTAG1AP78358 180 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 SLC9A3R2Q15599 337 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 HSPB2Q16082 182 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 SGCBQ16585 318 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 ZSCAN4Q8NAM6 433 aaPredicted RBP18.1■□□□□ 0.49
TMEM260-203ENST00000539559 TXNIPQ9H3M7 391 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 NDRG3Q9UGV2 375 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 LRP4O75096 1905 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 KIR2DS5A0A0G2JLQ3 304 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 A0A0G2JNG1 304 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 FAM221BA6H8Z2 402 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 KIR2DS3K7RE56 304 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 IL2RAP01589 272 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 CRHP06850 196 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 FSTP19883 344 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 PSMB6P28072 239 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 EFNA3P52797 238 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 HSD17B7P56937 341 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 MEF2DQ14814 521 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 KIR2DS5Q14953 304 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 NKAPLQ5M9Q1 402 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 THRSPQ92748 146 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 RNF126Q9BV68 326 aa18.1■□□□□ 0.49
TMEM260-203ENST00000539559 PHF7Q9BWX1 381 aaPredicted RBP18.1■□□□□ 0.49
TMEM260-203ENST00000539559 KLF2Q9Y5W3 355 aaPredicted RBP18.1■□□□□ 0.49
TMEM260-203ENST00000539559 TMED7-TICAM2A0A0A6YYA0 188 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms