RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ACTA2P62736 377 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 ACTG1P63261 375 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 ACTG2P63267 376 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 ACTC1P68032 377 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 ACTA1P68133 377 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 CKAP4Q07065 602 aaKnown RBP2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 GOLGA7BQ2TAP0 167 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 VAX1Q5SQQ9 334 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 TRIM40Q6P9F5 258 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 ACOT4Q8N9L9 421 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 OR5T1Q8NG75 326 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 DNAJB3Q8WWF6 145 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 FGF11Q92914 225 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 PPP1R14BQ96C90 147 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 HSFY1Q96LI6 401 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 SORT1Q99523 831 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 FOXC2Q99958 501 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 MICU1Q9BPX6 476 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 RSG1Q9BU20 258 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 SRXN1Q9BYN0 137 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 API5Q9BZZ5 524 aaKnown RBP2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 OR51J1Q9H342 316 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 TMEM38AQ9H6F2 299 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 SAMSN1Q9NSI8 373 aaKnown RBP2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 CLN6Q9NWW5 311 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 AK9Q5TCS8 1911 aa2.65□□□□□ -1.99
SMARCA1-204ENST00000478420 GLYATL1P3A0A0U1RQE8 302 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 A0A1B0GTI1 187 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 GOLGA6L10A6NI86 522 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 OR6C70A6NIJ9 312 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 CDC7O00311 574 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 MBTPS2O43462 519 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ZNF861PO60384 105 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 UGT1A9O60656 530 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 LSM8O95777 96 aaKnown RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 IGHV3-48P01763 117 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 CATP04040 527 aaKnown RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 HPNP05981 417 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 RHOCP08134 193 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ZNF250P15622 560 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 HTR1FP30939 366 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ACTR1BP42025 376 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 CSNK1DP48730 415 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 HCAR3P49019 387 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 DNASE1L1P49184 302 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ZNF133P52736 654 aaPredicted RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 VBP1P61758 197 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 VSNL1P62760 191 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 SLC35B1P78383 322 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 DR1Q01658 176 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TLE4Q04727 773 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TAL2Q16559 108 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 SMUG1Q53HV7 270 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ACTL10Q5JWF8 245 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 CLVS2Q5SYC1 327 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 DUPD1Q68J44 220 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ZNF530Q6P9A1 599 aaPredicted RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 WDR74Q6RFH5 385 aaPredicted RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 Q6ZVH6 145 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 AHSA2Q719I0 299 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 LHFPL3Q86UP9 236 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 NRMQ8IXM6 262 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 PDIK1LQ8N165 341 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TMEM156Q8N614 296 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TMEM252Q8N6L7 170 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 LRRC52Q8N7C0 313 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 HSD17B11Q8NBQ5 300 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ZNF738Q8NE65 137 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 VN1R2Q8NFZ6 395 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TTLQ8NG68 377 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 OR6K2Q8NGY2 324 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 OR2G2Q8NGZ5 317 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 RNF138Q8WVD3 245 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 NDRG1Q92597 394 aaKnown RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 SEC22AQ96IW7 307 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ITCHQ96J02 903 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 OR5B12Q96R08 314 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TSG101Q99816 390 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 ZNF426Q9BUY5 554 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 UBE2ZQ9H832 354 aaPredicted RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 FOLH1BQ9HBA9 442 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 CTPS2Q9NRF8 586 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 NLE1Q9NVX2 485 aaPredicted RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 MCUBQ9NWR8 336 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 C1orf109Q9NX04 203 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 SLC25A37Q9NYZ2 338 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 GNPTGQ9UJJ9 305 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 TBL2Q9Y4P3 447 aaKnown RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 LRRC42Q9Y546 428 aa2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 COL22A1Q8NFW1 1626 aaPredicted RBP2.64□□□□□ -1.99
SMARCA1-204ENST00000478420 IGKV1D-8A0A087WSZ0 117 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 IGKV6D-21A0A0A0MT36 114 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 ANKRD20A5PA0PJZ0 165 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 PINLYPA6NC86 204 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 GOLGA8JA6NMD2 632 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 GOLGA8KD6RF30 607 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 LOC110117498-PIK3R3F6TDL0 507 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 GOLGA8MH3BSY2 632 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 K7N7A8 449 aa2.63□□□□□ -1.99
SMARCA1-204ENST00000478420 SULT1C2O00338 296 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms