RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ALOX5APP20292 161 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 HTR1FP30939 366 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 APLNRP35414 380 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 CAPGP40121 348 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 GDI2P50395 445 aaKnown RBP8.42□□□□□ -1.06
CLK3-208ENST00000562626 ISL1P61371 349 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 PLP2Q04941 152 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 OCLNQ16625 522 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 TBC1D28Q2M2D7 210 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 SLC25A30Q5SVS4 291 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 SPATA46Q5T0L3 261 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 C11orf71Q6IPW1 123 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 SLC16A9Q7RTY1 509 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 DHRSXQ8N5I4 330 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 ZNF611Q8N823 705 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 NUP37Q8NFH4 326 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 OR51G2Q8NGK0 314 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 OR2AJ1Q8NGZ0 328 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 OTOSQ8NHW6 89 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 GTF3AQ92664 365 aaKnown RBP8.42□□□□□ -1.06
CLK3-208ENST00000562626 TFAP2CQ92754 450 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 FBXW5Q969U6 566 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 CNN2Q99439 309 aaKnown RBP8.42□□□□□ -1.06
CLK3-208ENST00000562626 COQ7Q99807 217 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 ATF6BQ99941 703 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 DHRS9Q9BPW9 319 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 CDADC1Q9BWV3 514 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 TEX12Q9BXU0 123 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 PRRG3Q9BZD7 231 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 MRPL37Q9BZE1 423 aaKnown RBP8.42□□□□□ -1.06
CLK3-208ENST00000562626 CA10Q9NS85 328 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 DDX28Q9NUL7 540 aaKnown RBP8.42□□□□□ -1.06
CLK3-208ENST00000562626 POU2F3Q9UKI9 436 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 ZFHX3Q15911 3703 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 VPS13CQ709C8 3753 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 SLC22A31A6NKX4 558 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 F5H5K5 113 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 J3QRE1 110 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ICMTO60725 284 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 NDUFS7O75251 213 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 SBK2P0C263 348 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ACSM4P0C7M7 580 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 SLC2A1P11166 492 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 PAX7P23759 505 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 OTX1P32242 354 aaPredicted RBP8.41□□□□□ -1.06
CLK3-208ENST00000562626 TTKP33981 857 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 CDKN1AP38936 164 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 MPV17P39210 176 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 OPRL1P41146 370 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 PRKXP51817 358 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 BLVRAP53004 296 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 UCP2P55851 309 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 IL5RAQ01344 420 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 GALK2Q01415 458 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ZNF91Q05481 1191 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 SNAI3Q3KNW1 292 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ALKBH6Q3KRA9 238 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 LRRN1Q6UXK5 716 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 IZUMO2Q6UXV1 221 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 PLEKHG7Q6ZR37 379 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 GID4Q8IVV7 300 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 SLC35F2Q8IXU6 374 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ZNF555Q8NEP9 628 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ABHD4Q8TB40 342 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 SLC25A40Q8TBP6 338 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 RNF133Q8WVZ7 376 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 TRUB1Q8WWH5 349 aaKnown RBP8.41□□□□□ -1.06
CLK3-208ENST00000562626 LGALS12Q96DT0 336 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 C4orf45Q96LM5 186 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 TBX5Q99593 518 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 KCNS3Q9BQ31 491 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 WACQ9BTA9 647 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 TRAF4Q9BUZ4 470 aaPredicted RBP8.41□□□□□ -1.06
CLK3-208ENST00000562626 HDHD2Q9H0R4 259 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 C1orf198Q9H425 327 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 MOV10Q9HCE1 1003 aaKnown RBP8.41□□□□□ -1.06
CLK3-208ENST00000562626 C8orf4Q9NR00 106 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 CENPMQ9NSP4 180 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 SLCO1C1Q9NYB5 712 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 HAO2Q9NYQ3 351 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ZNF319Q9P2F9 582 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 ST6GALNAC2Q9UJ37 374 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 STARD10Q9Y365 291 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 GRIP1Q9Y3R0 1128 aa8.41□□□□□ -1.06
CLK3-208ENST00000562626 H0YAE9 185 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 LYNP07948 512 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 OR4A8P0C604 315 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 DBTP11182 482 aaKnown RBP8.4□□□□□ -1.06
CLK3-208ENST00000562626 PCSK6P29122 969 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 GLRXP35754 106 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 RBMXP38159 391 aaKnown RBP8.4□□□□□ -1.06
CLK3-208ENST00000562626 FABP6P51161 128 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 ZNF85Q03923 595 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 HNRNPA0Q13151 305 aaKnown RBP8.4□□□□□ -1.06
CLK3-208ENST00000562626 DOC2BQ14184 412 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 HLXQ14774 488 aaPredicted RBP8.4□□□□□ -1.06
CLK3-208ENST00000562626 SWI5Q1ZZU3 235 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 LCN1P1Q5VSP4 162 aa8.4□□□□□ -1.06
CLK3-208ENST00000562626 PRSS45Q7RTY3 260 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms