RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-210	ENST00000497638	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	TMEM165	Q9HC07	324 aa		6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	MRPL39	Q9NYK5	338 aa	Known RBP	6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	CLN8	Q9UBY8	286 aa		6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	VPREB3	Q9UKI3	123 aa		6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	STAB2	Q8WWQ8	2551 aa		6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	EPPK1	P58107	5090 aa	Known RBP	6.25	□□□□□ -1.41
VPS45-210	ENST00000497638	DYNC2H1	Q8NCM8	4307 aa	Known RBP	6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	IGKV1D-42	A0A075B6H8	117 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	IGHV1-69D	A0A0B4J2H0	117 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CENPVL3	A0A0U1RRI6	287 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CGB1	A6NKQ9	187 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638		K7EIL1	84 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	SERPINI2	O75830	405 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	FSTL3	O95633	263 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	IGHV1-69	P01742	117 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	BGLAP	P02818	100 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CHRNG	P07510	517 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	MMP7	P09237	267 aa	Predicted RBP	6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CBL	P22681	906 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	STOM	P27105	288 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	EPHA3	P29320	983 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	GABRA5	P31644	462 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CCT5	P48643	541 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	GDI2	P50395	445 aa	Known RBP	6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CRISP3	P54108	245 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	BID	P55957	195 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	PPP1CB	P62140	327 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	EMX2	Q04743	252 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	PABPC1L2A	Q5JQF8	200 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	WDR88	Q6ZMY6	472 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	RFPL4B	Q6ZWI9	263 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	C10orf107	Q8IVU9	208 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CLIP4	Q8N3C7	705 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	SPERT	Q8NA61	448 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CHAC2	Q8WUX2	184 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	DNAJA4	Q8WW22	397 aa	Predicted RBP	6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	ITLN1	Q8WWA0	313 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	ZNF566	Q969W8	418 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	TESC	Q96BS2	214 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	TUBGCP3	Q96CW5	907 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	POM121L2	Q96KW2	1035 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	C3orf30	Q96M34	536 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	CCDC115	Q96NT0	180 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	MAN2C1	Q9NTJ4	1040 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	P2RX2	Q9UBL9	471 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	IL19	Q9UHD0	177 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	TBK1	Q9UHD2	729 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	USH1C	Q9Y6N9	552 aa		6.24	□□□□□ -1.41
VPS45-210	ENST00000497638	TENM2	Q9NT68	2774 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	RYR2	Q92736	4967 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638		A0A0U1RQK1	487 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638		A0A1B0GWA3	101 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	C5orf49	A4QMS7	147 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ZNF879	B4DU55	563 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	RNASEK-C17orf49	H0YIS7	233 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	PLPP3	O14495	311 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	PPP1R3D	O95685	299 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	LIPF	P07098	398 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	MMP9	P14780	707 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	CPE	P16870	476 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	GSTM3	P21266	225 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	MTNR1B	P49286	362 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ZNF84	P51523	738 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ARHGDIA	P52565	204 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	CLNS1A	P54105	237 aa	Known RBP	6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	RPS7	P62081	194 aa	Known RBP	6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	PCLAF	Q15004	111 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	MAPK11	Q15759	364 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ZNF404	Q494X3	552 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	CD300E	Q496F6	205 aa	Predicted RBP	6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ALG10B	Q5I7T1	473 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	WDR25	Q64LD2	544 aa	Predicted RBP	6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	FAM91A1	Q658Y4	838 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	SLC35D2	Q76EJ3	337 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	LSMEM1	Q8N8F7	131 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	SCCPDH	Q8NBX0	429 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	OR2Z1	Q8NG97	314 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	C10orf82	Q8WW14	230 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	SLC25A44	Q96H78	314 aa	Predicted RBP	6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ZIM3	Q96PE6	472 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	OR2V2	Q96R30	315 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	TBX15	Q96SF7	602 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	B9D2	Q9BPU9	175 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	TMEM246	Q9BRR3	403 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	KCNN2	Q9H2S1	579 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	ELOVL3	Q9HB03	270 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	CCNB1IP1	Q9NPC3	277 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	BTNL2	Q9UIR0	455 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	IFT52	Q9Y366	437 aa		6.23	□□□□□ -1.41
VPS45-210	ENST00000497638	LOC100509620	A0A075B734	347 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638		A0A0G2JPF8	293 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638	ANKRD61	A6NGH8	418 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638	CCDC154	A6NI56	674 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638	LRRC30	A6NM36	301 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638	HNRNPCL2	B2RXH8	293 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638	HNRNPCL3	B7ZW38	293 aa		6.22	□□□□□ -1.41
VPS45-210	ENST00000497638	C3orf84	H3BNL1	204 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms