RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ITLN1Q8WWA0 313 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 MCUR1Q96AQ8 359 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 OR52D1Q9H346 318 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 C7orf69Q9H7B7 122 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 IL19Q9UHD0 177 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 MAGEL2Q9UJ55 1249 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 PCDHB10Q9UN67 800 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 IGLV1-36A0A0B4J1U3 117 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 HAX1O00165 279 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ARPC3O15145 178 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 SURF4O15260 269 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 OR10H3O60404 316 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 IGHV2-70P01814 119 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ADRA2CP18825 462 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 EPHA1P21709 976 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ZFP36P26651 326 aaKnown RBP15.91■□□□□ 0.14
SF3A1-205ENST00000463818 SLC6A6P31641 620 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 RGS6P49758 472 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 DBPQ10586 325 aaPredicted RBP15.91■□□□□ 0.14
SF3A1-205ENST00000463818 HLXQ14774 488 aaPredicted RBP15.91■□□□□ 0.14
SF3A1-205ENST00000463818 SAMD4BQ5PRF9 694 aaKnown RBP15.91■□□□□ 0.14
SF3A1-205ENST00000463818 PGM2L1Q6PCE3 622 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 CORO6Q6QEF8 472 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 C1QL2Q7Z5L3 287 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 JAZF1Q86VZ6 243 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 PGAM4Q8N0Y7 254 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 OR6V1Q8N148 313 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 FITM2Q8N6M3 262 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ZNF283Q8N7M2 679 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ATG16L2Q8NAA4 619 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 SEMA6DQ8NFY4 1073 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 OR4K13Q8NH42 304 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 FANK1Q8TC84 345 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 NSMCE2Q96MF7 247 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 NMNAT3Q96T66 252 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ARL8BQ9NVJ2 186 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 PTTG3PQ9NZH4 202 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 ATPIF1Q9UII2 106 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 LHFPL6Q9Y693 200 aa15.91■□□□□ 0.14
SF3A1-205ENST00000463818 J3QW42 95 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 RENP00797 406 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 HIST1H1CP16403 213 aaKnown RBP15.9■□□□□ 0.14
SF3A1-205ENST00000463818 GATA3P23771 443 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 FPR3P25089 353 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 RSPO1Q2MKA7 263 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-205ENST00000463818 OR2T2Q6IF00 324 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 FBXW12Q6X9E4 464 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 LRRC28Q86X40 367 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-205ENST00000463818 CCDC197Q8NCU1 140 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 NANPQ8TBE9 248 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 ZFAND2BQ8WV99 257 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 OR2V2Q96R30 315 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 COQ7Q99807 217 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 IFT27Q9BW83 186 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 OPN4Q9UHM6 478 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 TAGLN3Q9UI15 199 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 TMCC3Q9ULS5 477 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 PPP1R3CQ9UQK1 317 aa15.9■□□□□ 0.14
SF3A1-205ENST00000463818 ARPC2O15144 300 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 FOXH1O75593 365 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 FABP3P05413 133 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 RRM2P31350 389 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 IFNGR2P38484 337 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 GSSP48637 474 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 SLC27A4Q6P1M0 643 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 USP43Q70EL4 1123 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 OR8G5Q8NG78 346 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 GNPDA2Q8TDQ7 276 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 APOBEC3DQ96AK3 386 aaPredicted RBP15.89■□□□□ 0.13
SF3A1-205ENST00000463818 HDHD2Q9H0R4 259 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 PATZ1Q9HBE1 687 aaKnown RBP15.89■□□□□ 0.13
SF3A1-205ENST00000463818 IL1RAPQ9NPH3 570 aa15.89■□□□□ 0.13
SF3A1-205ENST00000463818 RPRD1BQ9NQG5 326 aaKnown RBP15.89■□□□□ 0.13
SF3A1-205ENST00000463818 ANK2Q01484 3957 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 IDH3BO43837 385 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 NOS3P29474 1203 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 COX10Q12887 443 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 SLC36A3Q495N2 470 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 TMEM155Q4W5P6 130 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 C12orf54Q6X4T0 127 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 LINC00346Q8IVM7 164 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 KLHL36Q8N4N3 616 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 SPICQ8N5J4 248 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 SLC26A10Q8NG04 563 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 OR13G1Q8NGZ3 307 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 ZNF582Q96NG8 517 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-205ENST00000463818 SIGLEC11Q96RL6 698 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 CDADC1Q9BWV3 514 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 MMP26Q9NRE1 261 aa15.88■□□□□ 0.13
SF3A1-205ENST00000463818 PPIAL4EA0A075B759 164 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 PPIAL4CA0A0B4J2A2 164 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 OR6C68A6NDL8 312 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 PPIAL4DF5H284 164 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 H0YL77 283 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 TMEM178BH3BS89 294 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 PPIAL4FP0DN26 164 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 HILS1P60008 231 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 BTG1P62324 171 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 TSPAN31Q12999 210 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 ZMYND11Q15326 602 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms