RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RPA3P35244 121 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ARL2P36404 184 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 RASSF2P50749 326 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 DLX6P56179 175 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 PEX3P56589 373 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ERVPABLB-1P60509 514 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 RPS14P62263 151 aaKnown RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 TFAMQ00059 246 aaKnown RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF85Q03923 595 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 FCHO2Q0JRZ9 810 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 SLC1A5Q15758 541 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 PVRIGQ6DKI7 326 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 RWDD4Q6NW29 188 aaKnown RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 TRIM40Q6P9F5 258 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 TMEM207Q6UWW9 146 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 Q6ZTK2 550 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 GDPD3Q7L5L3 318 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 PIM3Q86V86 326 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 HORMAD1Q86X24 394 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 LACC1Q8IV20 430 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 C10orf107Q8IVU9 208 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 FBXL14Q8N1E6 418 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF383Q8NA42 475 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR10W1Q8NGF6 305 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR10X1Q8NGY0 326 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR6K3Q8NGY3 331 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR2T11Q8NH01 316 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 RPLP0P6Q8NHW5 317 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 MRGPRDQ8TDS7 321 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 GATAD1Q8WUU5 269 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 SEC22AQ96IW7 307 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 TBX15Q96SF7 602 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 HBEGFQ99075 208 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 TSC22D3Q99576 134 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF2Q9BSG1 426 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 HCAR1Q9BXC0 346 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF442Q9H7R0 627 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ELL3Q9HB65 397 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 NMUR1Q9HB89 426 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ADGRL4Q9HBW9 690 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 FAM206AQ9NX38 181 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 NUDT4Q9NZJ9 180 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 SMPXQ9UHP9 88 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 BTNL2Q9UIR0 455 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 GNPTGQ9UJJ9 305 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF391Q9UJN7 358 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 KLHL21Q9UJP4 597 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 RALYQ9UKM9 306 aaKnown RBP3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 NTNG1Q9Y2I2 539 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 NDUFAF1Q9Y375 327 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 FRMPD3Q5JV73 1810 aa3.72□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF816-ZNF321PA0A0X1KG74 233 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 RPS10-NUDT3A0A1W2PQS6 291 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 LAD1O00515 517 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 MRPS12O15235 138 aaKnown RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 SURF4O15260 269 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ATP6V0E1O15342 81 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 FABP7O15540 132 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 DPM1O60762 260 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 CTSVO60911 334 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 BCAR3O75815 825 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 TBX6O95947 436 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR8U9P0C7N5 309 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 IGHV4-30-4P0DP06 118 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 GTF2F2P13984 249 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 PVRP15151 417 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF250P15622 560 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 SDC1P18827 310 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 BCL3P20749 454 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 HTR1DP28221 377 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 PMELP40967 661 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 CRYBA4P53673 196 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 FGF8P55075 233 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 TCL1AP56279 114 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF45Q02386 682 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 TGFBR3Q03167 851 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 CD164Q04900 197 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 SKP2Q13309 424 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 FAM27D1Q5T7N8 215 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 OTUD1Q5VV17 481 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 CST9Q5W186 159 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF549Q6P9A3 640 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 DHRS4L2Q6PKH6 230 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 GFRALQ6UXV0 394 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 APOOLQ6UXV4 268 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 C12orf54Q6X4T0 127 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 AMIGO2Q86SJ2 522 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM219Q86XT9 240 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 PHF13Q86YI8 300 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 PRR22Q8IZ63 422 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR4D10Q8NGI6 311 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR8U1Q8NH10 309 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 APOBEC4Q8WW27 367 aaKnown RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 RCN3Q96D15 328 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 TCEAL4Q96EI5 215 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 CMTM7Q96FZ5 175 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 C17orf77Q96MU5 243 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF681Q96N22 645 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF599Q96NL3 588 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms