RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SSBP1Q04837 148 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC10A1Q14973 349 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ATXN7L3Q14CW9 347 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ACER2Q5QJU3 275 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 STEAP1BQ6NZ63 245 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM81Q6P7N7 255 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TRILQ7L0X0 811 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TCTE3Q8IZS6 198 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF321PQ8N8H1 164 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2I1PQ8NGU4 316 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2V1Q8NHB1 315 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GIMAP1Q8WWP7 306 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 C4orf45Q96LM5 186 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GPX7Q96SL4 187 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZCCHC4Q9H5U6 513 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 METTL17Q9H7H0 456 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 QPCTLQ9NXS2 382 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TAS2R4Q9NYW5 299 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GDF2Q9UK05 429 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 FBXL4Q9UKA2 621 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 A6NLC8 198 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 H7C417 338 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SULT1C2O00338 296 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CXCL13O43927 109 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TSPAN2O60636 221 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZFPL1O95159 310 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 EIF4EP06730 217 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LPLP06858 475 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 FGF5P12034 268 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SERPINA2P20848 420 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SRD5A2P31213 254 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 RPS27P42677 84 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 VEGFCP49767 419 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 EFNA3P52797 238 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TAS2R20P59543 309 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF85Q03923 595 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 DBPQ10586 325 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 AIMP2Q13155 320 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LAIR1Q6GTX8 287 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 HAGHLQ6PII5 290 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CORO6Q6QEF8 472 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LRRC69Q6ZNQ3 347 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CFAP77Q6ZQR2 320 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 Q6ZTK2 550 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 MOB3CQ70IA8 216 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TSEN54Q7Z6J9 526 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 MRGPREQ86SM8 312 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TRAPPC6BQ86SZ2 158 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ANGPTL5Q86XS5 388 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ADGRG3Q86Y34 549 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 C12orf45Q8N5I9 185 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SEMA6DQ8NFY4 1073 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SNIP1Q8TAD8 396 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 FLVCR1-AS1Q8TAF5 88 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 APOBEC4Q8WW27 367 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 C11orf40Q8WZ69 217 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 PIGCQ92535 297 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TSNAXQ99598 290 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 PBOV1Q9GZY1 135 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CALHM2Q9HA72 323 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC17A5Q9NRA2 495 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GSKIPQ9P0R6 139 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LHX6Q9UPM6 363 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ARHGEF17Q96PE2 2063 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SPTBP11277 2137 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM82A0PJX8 343 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 C21orf140B9A014 251 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 M0R135 149 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC17A2O00624 439 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ABHD16AO95870 558 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 BGLAPP02818 100 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 HRGP04196 525 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CD1AP06126 327 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 M6PRP20645 277 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CDK2P24941 298 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 HOXA6P31267 233 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CSF2RBP32927 897 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 MMP15P51511 669 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GGTLC2Q14390 218 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GRK1Q15835 563 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CLVS2Q5SYC1 327 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM27D1Q5T7N8 215 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CD276Q5ZPR3 534 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LAIR2Q6ISS4 152 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SGPP2Q8IWX5 399 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CMTM4Q8IZR5 234 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF680Q8NEM1 530 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 DNAAF1Q8NEP3 725 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SMIM4Q8WVI0 70 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF799Q96GE5 643 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 DCLRE1CQ96SD1 692 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 MICU1Q9BPX6 476 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ST6GALNAC5Q9BVH7 336 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF471Q9BX82 626 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SELENOIQ9C0D9 397 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF436Q9C0F3 470 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC5A7Q9GZV3 580 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC22A13Q9Y226 551 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LSM2Q9Y333 95 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms