RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 FBXW5Q969U6 566 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 SLAMF6Q96DU3 332 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF799Q96GE5 643 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 MS4A5Q9H3V2 200 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 C14orf119Q9NWQ9 140 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
U2AF1-212ENST00000496462 TMEM269A0A1B0GVZ9 245 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 LYPD3O95274 346 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 HLA-DOBP13765 273 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ATP6V1B1P15313 513 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 MAP2K3P46734 347 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 SNTB2Q13425 540 aaKnown RBP7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ACSM5Q6NUN0 579 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 PGAP1Q75T13 922 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 LINC01560Q8TB33 94 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 SYNPRQ8TBG9 265 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 PIGTQ969N2 578 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 PLPPR2Q96GM1 343 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF582Q96NG8 517 aaPredicted RBP7.58□□□□□ -1.2
U2AF1-212ENST00000496462 UBTD1Q9HAC8 227 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 HINT3Q9NQE9 182 aaKnown RBP7.58□□□□□ -1.2
U2AF1-212ENST00000496462 LRRC30A6NM36 301 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 BHLHE40O14503 412 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ZNHIT1O43257 154 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 CDKN2AP42771 156 aaKnown RBP7.58□□□□□ -1.2
U2AF1-212ENST00000496462 AQP4P55087 323 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 EGR3Q06889 387 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 FAM189A2Q15884 450 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 FBXL19-AS1Q494R0 122 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 HIKESHIQ53FT3 197 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 C6orf52Q5T4I8 152 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 RTL6Q6ICC9 239 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 STAC2Q6ZMT1 411 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ADGRE4PQ86SQ3 457 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF511Q8NB15 262 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 OR1J1Q8NGS3 322 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF519Q8TB69 540 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 UFD1Q92890 307 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 HPS1Q92902 700 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 GPER1Q99527 375 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 KCNJ15Q99712 375 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 SPOCK3Q9BQ16 436 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 WFDC6Q9BQY6 131 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 NTN4Q9HB63 628 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 CTLA4P16410 223 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 IGHV1-2P23083 117 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 PSMB9P28065 219 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 FMODQ06828 376 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 MED22Q15528 200 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 GABRA6Q16445 453 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 C12orf73Q69YU5 71 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 BCL2L2Q92843 193 aaPredicted RBP7.57□□□□□ -1.2
U2AF1-212ENST00000496462 MUS81Q96NY9 551 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 PLK3Q9H4B4 646 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 GLS2Q9UI32 602 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 COMMD3-BMI1R4GMX3 469 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 DNAJC13O75165 2243 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 ARPC4-TTLL3A0A0A6YYG9 625 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 ABCD4O14678 606 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 THY1P04216 161 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 TNFRSF1AP19438 455 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 PSMA1P25786 263 aaKnown RBP7.57□□□□□ -1.2
U2AF1-212ENST00000496462 KLF3P57682 345 aaPredicted RBP7.57□□□□□ -1.2
U2AF1-212ENST00000496462 MAD2L1BPQ15013 274 aaPredicted RBP7.57□□□□□ -1.2
U2AF1-212ENST00000496462 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 MDP1Q86V88 176 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 LINC00346Q8IVM7 164 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 TMEM123Q8N131 208 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 OR4Q3Q8NH05 313 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 ITLN2Q8WWU7 325 aaPredicted RBP7.57□□□□□ -1.2
U2AF1-212ENST00000496462 DIRC2Q96SL1 478 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 SLC29A1Q99808 456 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 VRK1Q99986 396 aaPredicted RBP7.57□□□□□ -1.2
U2AF1-212ENST00000496462 OR2H1Q9GZK4 316 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 B3GAT1Q9P2W7 334 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 SEC14L4Q9UDX3 406 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 A6NLC8 198 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 MYL9P24844 172 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 TLE4Q04727 773 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 C1orf87Q8N0U7 546 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 FBXO17Q96EF6 278 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 FOXN4Q96NZ1 517 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 NPAS1Q99742 590 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 AMBNQ9NP70 447 aa7.57□□□□□ -1.2
U2AF1-212ENST00000496462 SYT7O43581 403 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ENTPD6O75354 484 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 SULT1C4O75897 302 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 SBK2P0C263 348 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CDAP32320 146 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 PSMD7P51665 324 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 TAB1Q15750 504 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 C6orf141Q5SZD1 244 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF691Q5VV52 312 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 SEZ6L2Q6UXD5 910 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 TMEM179BQ7Z7N9 219 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 AKR7LQ8NHP1 331 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 RHOXF1Q8NHV9 184 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms