RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 FOXL2NBQ6ZUU3 175 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
BEST1-208ENST00000534553 LRRTM1Q86UE6 522 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 LINC00346Q8IVM7 164 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 WDFY1Q8IWB7 410 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 OR2M7Q8NG81 312 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 RFT1Q96AA3 541 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 ZC3HAV1LQ96H79 300 aaKnown RBP11.9□□□□□ -0.5
BEST1-208ENST00000534553 OR2M2Q96R28 347 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 SLC25A18Q9H1K4 315 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 G6PC2Q9NQR9 355 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 DEPPQ9NTK1 212 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 MALT1Q9UDY8 824 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 CAMK2AQ9UQM7 478 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 KLF13Q9Y2Y9 288 aaPredicted RBP11.9□□□□□ -0.5
BEST1-208ENST00000534553 EMC9Q9Y3B6 208 aa11.9□□□□□ -0.5
BEST1-208ENST00000534553 MRPS18BQ9Y676 258 aaKnown RBP11.9□□□□□ -0.5
BEST1-208ENST00000534553 A0A0G2JMP0 313 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 A0A0X1KG70 313 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 A0A1B0GTH9 108 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 EIF1AYO14602 144 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 RAMP1O60894 148 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 TRAPPC6AO75865 159 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 HPNP05981 417 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 SNRPBP14678 240 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 CSRP1P21291 193 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 MSR1P21757 451 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 GFRA1P56159 465 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 GRB2P62993 217 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 SPINK14Q6IE38 97 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 LRFN4Q6PJG9 635 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 NRARPQ7Z6K4 114 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 GGNQ86UU5 652 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 CADM3Q8N126 398 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 OR4M2Q8NGB6 313 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 LGALS14Q8TCE9 139 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 ASB5Q8WWX0 329 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 ADGRG7Q96K78 797 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 ABCG5Q9H222 651 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 NELFAQ9H3P2 528 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 LIN7BQ9HAP6 207 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 CENPMQ9NSP4 180 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 RBFOX1Q9NWB1 397 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 PAQR5Q9NXK6 330 aaPredicted RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 IL17BQ9UHF5 180 aa11.89□□□□□ -0.51
BEST1-208ENST00000534553 GDF2Q9UK05 429 aaPredicted RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 PCDHGA9Q9Y5G4 932 aaKnown RBP11.89□□□□□ -0.51
BEST1-208ENST00000534553 SMAD9O15198 467 aaKnown RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 SULT1B1O43704 296 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 RFPL3SP0C7P2 107 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 HSD11B1P28845 292 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 MAP2K3P46734 347 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 ZNF84P51523 738 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 PSMA6P60900 246 aaKnown RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 MFGE8Q08431 387 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 TAB1Q15750 504 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 CARD17Q5XLA6 110 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 ABLIM2Q6H8Q1 611 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 SPATC1Q76KD6 591 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 SYT9Q86SS6 491 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 OR51A4Q8NGJ6 313 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 ENKURQ8TC29 256 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 SNRNP27Q8WVK2 155 aaKnown RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 S100A16Q96FQ6 103 aaKnown RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 GFI1Q99684 422 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 NEURL2Q9BR09 285 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 FAM206AQ9NX38 181 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 STEAP1Q9UHE8 339 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 FOXD3Q9UJU5 478 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 CDV3Q9UKY7 258 aaKnown RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 SLC22A13Q9Y226 551 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 PCSK5Q92824 1860 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 LOC107986453A0A1B0GWG9 222 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 LIPCP11150 499 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 MNDAP41218 407 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 RFX2P48378 723 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 TCF15Q12870 199 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 HYAL4Q2M3T9 481 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 WIPI1Q5MNZ9 446 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 HES5Q5TA89 166 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 GLT8D1Q68CQ7 371 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 ELMOD2Q8IZ81 293 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 RDH10Q8IZV5 341 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 GALNT16Q8N428 558 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 NKAIN3Q8N8D7 197 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 DRAXINQ8NBI3 349 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 OR5H6Q8NGV6 325 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 FOXRED1Q96CU9 486 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 AGAP4Q96P64 663 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 THAP7Q9BT49 309 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
BEST1-208ENST00000534553 C11orf54Q9H0W9 315 aaPredicted RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 NUFIP1Q9UHK0 495 aaKnown RBP11.88□□□□□ -0.51
BEST1-208ENST00000534553 OR5H15A6NDH6 313 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms