RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TMEM201Q5SNT2 666 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 STEAP3Q658P3 488 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 C5orf46Q6UWT4 87 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 CFAP77Q6ZQR2 320 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 MYPOPQ86VE0 399 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF610Q8N9Z0 462 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF416Q9BWM5 594 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ULBP2Q9BZM5 246 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 NOX3Q9HBY0 568 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 TIGARQ9NQ88 270 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ABCB10Q9NRK6 738 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 RASD1Q9Y272 281 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 PEX16Q9Y5Y5 336 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 SMIM30A4D0T7 59 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 ANKRD61A6NGH8 418 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 RAD51DO75771 328 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 RENP00797 406 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 SBK2P0C263 348 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR8G3PP0DMU2 310 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 PAICSP22234 425 aaKnown RBP8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 TLE1Q04724 770 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 HNRNPA0Q13151 305 aaKnown RBP8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 RPUSD3Q6P087 351 aaKnown RBP8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 TIGD4Q8IY51 512 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF100Q8IYN0 542 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 RDH10Q8IZV5 341 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 PARP16Q8N5Y8 322 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR13C5Q8NGS8 318 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR6X1Q8NH79 312 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 MS4A3Q96HJ5 214 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 MGLLQ99685 303 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 TTYH2Q9BSA4 534 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR51B6Q9H340 312 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 ACOXLQ9NUZ1 547 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 LSM2Q9Y333 95 aaKnown RBP8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 DOPEY2Q9Y3R5 2298 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 A0A0G2JNJ9 132 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 LOC100506127A0A0U1RQW1 187 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 J3QLW9 94 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 CCRL2O00421 344 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 EEF1E1O43324 174 aaKnown RBP8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 TBX1O43435 398 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 AGFG2O95081 481 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 PTTG1O95997 202 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 GLI4P10075 376 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF19P17023 458 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 S100A5P33763 92 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 CAPZA2P47755 286 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 SSX1Q16384 188 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 TIMM50Q3ZCQ8 353 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 RNLSQ5VYX0 342 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR7E24Q6IFN5 339 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 DCXRQ7Z4W1 244 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 CCDC190Q86UF4 302 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC26A10Q8NG04 563 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR10S1Q8NGN2 331 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 AKR7LQ8NHP1 331 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 FAM57AQ8TBR7 257 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 CHAC2Q8WUX2 184 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 HPS1Q92902 700 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 FBXO17Q96EF6 278 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 MAP6Q96JE9 813 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 CHCHD6Q9BRQ6 235 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 VSX1Q9NZR4 365 aaPredicted RBP8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 KLHL9Q9P2J3 617 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 Q9UFV3 132 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC5A6Q9Y289 635 aa8.37□□□□□ -1.07
HMGCLL1-206ENST00000428842 A0A075B6Q4 140 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 A0A1W2PPK0 400 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 E9PLN8 166 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 GLCEO94923 617 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 IGHMP01871 453 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 GNLYP22749 145 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 ARF1P84077 181 aaKnown RBP8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 GALK2Q01415 458 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 HIST3H3Q16695 136 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 TSTQ16762 297 aaKnown RBP8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 SFRP5Q5T4F7 317 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 MEDAGQ5VYS4 303 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 GPR139Q6DWJ6 353 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 KLBQ86Z14 1044 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 SPRYD4Q8WW59 207 aaPredicted RBP8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 STARD4Q96DR4 205 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 C4orf36Q96KX1 117 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 Q96MT0 163 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 OPALINQ96PE5 141 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 SOX7Q9BT81 388 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 RACGAP1Q9H0H5 632 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 GPR35Q9HC97 309 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 CENPMQ9NSP4 180 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 GTF2A1LQ9UNN4 478 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 RPL36Q9Y3U8 105 aaKnown RBP8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 LHFPL6Q9Y693 200 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 ITPR2Q14571 2701 aa8.36□□□□□ -1.07
HMGCLL1-206ENST00000428842 DAPL1A0PJW8 107 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms