RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 MAFAQ8NHW3 353 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-203ENST00000396268 SHDQ96IW2 340 aa12.65□□□□□ -0.38
CCHCR1-203ENST00000396268 ADOQ96SZ5 270 aa12.65□□□□□ -0.38
CCHCR1-203ENST00000396268 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
CCHCR1-203ENST00000396268 ASF1BQ9NVP2 202 aa12.65□□□□□ -0.38
CCHCR1-203ENST00000396268 FAM221BA6H8Z2 402 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 C17orf51A8MQB3 221 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 M0QYG6 137 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 DOK2O60496 412 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 SPARCP09486 303 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 FLI1Q01543 452 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 EGR3Q06889 387 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 RIPPLY1Q0D2K3 151 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 SKP2Q13309 424 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 GAL3ST4Q96RP7 486 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 OR8D2Q9GZM6 311 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 KIR2DS5A0A0G2JLQ3 304 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 A0A0G2JNG1 304 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 KIR2DS3K7RE56 304 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 HCRTR2O43614 444 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 FUT7Q11130 342 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 KIR2DS5Q14953 304 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 ZNF615Q8N8J6 731 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 METTL21AQ8WXB1 218 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 CPNE2Q96FN4 548 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 NXF5Q9H1B4 397 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 CLDN16Q9Y5I7 305 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
CCHCR1-203ENST00000396268 LOC100289279A0A1B0GTE1 492 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CDC14CA4D256 554 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 SIGLEC6O43699 453 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 SRPX2O60687 465 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 UTS2O95399 124 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 WDPCPO95876 746 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CSF2RBP32927 897 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 DNM1P46Q6ZS02 220 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 PUSL1Q8N0Z8 303 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 GABRG1Q8N1C3 465 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 OTOSQ8NHW6 89 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CLDN23Q96B33 292 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 MAP3K3Q99759 626 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 FSCN3Q9NQT6 498 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 SLC22A11Q9NSA0 550 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 FARSAQ9Y285 508 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 TMEM200CA6NKL6 621 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 RAB3DO95716 219 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CSRP1P21291 193 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CXCR1P25024 350 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CXCL12P48061 93 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 SCGB2B2Q4G0G5 96 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 NAXDQ8IW45 347 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 FAM219AQ8IW50 185 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CLEC1AQ8NC01 280 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 OR1S2Q8NGQ3 325 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 DHDHQ9UQ10 334 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 DCDC2BA2VCK2 349 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 TXNDC12O95881 172 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 WNT11O96014 354 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 PNPP00491 289 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 AMY2AP04746 511 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 PVALBP20472 110 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 PRTGQ2VWP7 1150 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 UQCC2Q9BRT2 126 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 NRSN2Q9GZP1 204 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 DNTTIP1Q9H147 329 aa12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-203ENST00000396268 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 OR5K4A6NMS3 321 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 SLC17A2O00624 439 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 SLC16A7O60669 478 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 OR4E1P0C645 316 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 ACTBP60709 375 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 ACTG1P63261 375 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 FGL1Q08830 312 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 TOMM34Q15785 309 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 EMC4Q5J8M3 183 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 PABPC1L2AQ5JQF8 200 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 TMEM205Q6UW68 189 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 LDLRAD3Q86YD5 345 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 BEST3Q8N1M1 668 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 ARHGEF39Q8N4T4 335 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 C12orf45Q8N5I9 185 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 OR1J4Q8NGS1 313 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 POTEKPQ9BYX7 375 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 TINAGL1Q9GZM7 467 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 CKLFQ9UBR5 152 aa12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-203ENST00000396268 TMEM184BQ9Y519 407 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms