RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 GCNT6Q5T4J0 391 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 NXNQ6DKJ4 435 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 ZNF774Q6NX45 483 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 SLC27A4Q6P1M0 643 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 ZNF613Q6PF04 617 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 TTC33Q6PID6 262 aaPredicted RBP11.17□□□□□ -0.62
NDC1-202ENST00000480952 ARL9Q6T311 187 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 LINC00114Q6XXX2 140 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 Q6ZPA2 131 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 MSANTD1Q6ZTZ1 278 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 TBC1D15Q8TC07 691 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 SSMEM1Q8WWF3 244 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 C4orf45Q96LM5 186 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 MCHR1Q99705 422 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 WFDC6Q9BQY6 131 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 MRPL13Q9BYD1 178 aaKnown RBP11.17□□□□□ -0.62
NDC1-202ENST00000480952 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 SLCO1B3Q9NPD5 702 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 ZNF229Q9UJW7 825 aa11.17□□□□□ -0.62
NDC1-202ENST00000480952 G3V4G9 280 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 KPNA4O00629 521 aaPredicted RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 FMO6PO60774 539 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 SERPINB7O75635 380 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 TRMUO75648 421 aaKnown RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 SLC2A10O95528 541 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 PRB2P02812 416 aaPredicted RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 CSF1P09603 554 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 THRBP10828 461 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 ACADSP16219 412 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 GSTM3P21266 225 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 BGNP21810 368 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 POLR2JP52435 117 aaKnown RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 C10orf128Q5T292 105 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 RUSC1-AS1Q66K80 236 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 Q6ZR03 302 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 NLRC3Q7RTR2 1065 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 HDDC2Q7Z4H3 204 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 NSMAFQ92636 917 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 DACT3Q96B18 629 aaPredicted RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 MAGEB18Q96M61 343 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 OR2V2Q96R30 315 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 ZNF607Q96SK3 696 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 PCGF1Q9BSM1 259 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 ROPN1BQ9BZX4 212 aaPredicted RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 OR2H1Q9GZK4 316 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 EVA1AQ9H8M9 152 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 ROPN1Q9HAT0 212 aaPredicted RBP11.16□□□□□ -0.62
NDC1-202ENST00000480952 GCM1Q9NP62 436 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.16□□□□□ -0.62
NDC1-202ENST00000480952 KIF17Q9P2E2 1029 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 TIMM10BQ9Y5J6 103 aa11.16□□□□□ -0.62
NDC1-202ENST00000480952 C5orf63A6NC05 138 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 TRPC5OSA6NMA1 111 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 CENPBD1B2RD01 187 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 IFNL4K9M1U5 179 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 CHP2O43745 196 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 GPR137BO60478 399 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ICMTO60725 284 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ABHD16AO95870 558 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 F13BP05160 661 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ASAH2BP0C7U1 165 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 AQP1P29972 269 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 MMP16P51512 607 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ZNF133P52736 654 aaPredicted RBP11.15□□□□□ -0.62
NDC1-202ENST00000480952 FAM189A2Q15884 450 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 RUNDC3AQ59EK9 446 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 REC114Q7Z4M0 266 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 NANOGNBQ7Z5D8 188 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 GOLGA6L1Q8N7Z2 621 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ATG16L2Q8NAA4 619 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 OR8B3Q8NGG8 313 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 VANGL1Q8TAA9 524 aaPredicted RBP11.15□□□□□ -0.62
NDC1-202ENST00000480952 GTF2H4Q92759 462 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 NABP1Q96AH0 204 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 SEPHS2Q99611 448 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 PAIP1Q9H074 479 aaKnown RBP11.15□□□□□ -0.62
NDC1-202ENST00000480952 WNT5BQ9H1J7 359 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 ZIM2Q9NZV7 527 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 UGT2A1Q9Y4X1 527 aa11.15□□□□□ -0.62
NDC1-202ENST00000480952 TANC2Q9HCD6 1990 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 CPSF4LA6NMK7 179 aaKnown RBP11.14□□□□□ -0.63
NDC1-202ENST00000480952 M0R3H8 397 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
NDC1-202ENST00000480952 HDAC3O15379 428 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 PIP5K1CO60331 668 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
NDC1-202ENST00000480952 SLC6A2P23975 617 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 GUCA1AP43080 201 aaPredicted RBP11.14□□□□□ -0.63
NDC1-202ENST00000480952 PITPNBP48739 271 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 DAP3P51398 398 aaKnown RBP11.14□□□□□ -0.63
NDC1-202ENST00000480952 PCBP3P57721 371 aaKnown RBP11.14□□□□□ -0.63
NDC1-202ENST00000480952 PCBD1P61457 104 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 FAM27BQ5VT28 67 aa11.14□□□□□ -0.63
NDC1-202ENST00000480952 SLC2A7Q6PXP3 512 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms