RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 C8orf44Q96CB5 159 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 PTDSS2Q9BVG9 487 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ARL6Q9H0F7 186 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 TTYH1Q9H313 450 aaPredicted RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 CUTCQ9NTM9 273 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 MSRAQ9UJ68 235 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 FXYD6-FXYD2A0A087WZ82 144 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 A8MVM7 634 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 SLC16A7O60669 478 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 NPIPB7O75200 414 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 RAB3DO95716 219 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 SPARCP09486 303 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 IGFBP3P17936 291 aaPredicted RBP10.17□□□□□ -0.78
USP4-205ENST00000431357 HTR2CP28335 458 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 INSM1Q01101 510 aaPredicted RBP10.17□□□□□ -0.78
USP4-205ENST00000431357 EBPQ15125 230 aaKnown RBP10.17□□□□□ -0.78
USP4-205ENST00000431357 C4orf46Q504U0 113 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 YOD1Q5VVQ6 348 aaPredicted RBP10.17□□□□□ -0.78
USP4-205ENST00000431357 NDUFAF7Q7L592 441 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 MARCH3Q86UD3 253 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
USP4-205ENST00000431357 OR4D10Q8NGI6 311 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 OR6K3Q8NGY3 331 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 STK35Q8TDR2 534 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 ASB5Q8WWX0 329 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 PTX4Q96A99 478 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 SLC25A36Q96CQ1 311 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 TGM7Q96PF1 710 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 GAL3ST4Q96RP7 486 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 DPYSL5Q9BPU6 564 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 TBL1XR1Q9BZK7 514 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 RAB33BQ9H082 229 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 MRPL22Q9NWU5 206 aaKnown RBP10.17□□□□□ -0.78
USP4-205ENST00000431357 SLC22A13Q9Y226 551 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 KCNMB2Q9Y691 235 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 CHD9Q3L8U1 2897 aa10.17□□□□□ -0.78
USP4-205ENST00000431357 TMED7-TICAM2A0A0A6YYA0 188 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 IGHV5-51A0A0C4DH38 117 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 A0A1B0GW55 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 A0A1W2PPC1 479 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 SLC22A23A1A5C7 686 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 RFPL4AA6NLU0 287 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 RFPL4AL1F8VTS6 287 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 NUDT21O43809 227 aaKnown RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 OR2T1O43869 369 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 KDM4BO94953 1096 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 SIX6O95475 246 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 NUDT14O95848 222 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4L2P0CJ85 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4L3P0CJ86 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4L4P0CJ87 422 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4L5P0CJ88 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4L6P0CJ89 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4L7P0CJ90 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 AGTR1P30556 359 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 NUP62P37198 522 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 PPM1FP49593 454 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 PNLIPRP2P54317 469 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 ADAM8P78325 824 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 PLCXD2Q0VAA5 305 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 EIF2B1Q14232 305 aaKnown RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 UBXN2BQ14CS0 331 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 TOMM34Q15785 309 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 C2orf68Q2NKX9 166 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 FAM209BQ5JX69 171 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 C11orf88Q6PI97 169 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 SLC35D2Q76EJ3 337 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 OVCH2Q7RTZ1 564 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 BIVMQ86UB2 503 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 PRR22Q8IZ63 422 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 C12orf45Q8N5I9 185 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 OR6S1Q8NH40 331 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 ATOH1Q92858 354 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 DAZLQ92904 295 aaKnown RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 SEH1LQ96EE3 360 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 WDR89Q96FK6 387 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 ZDHHC12Q96GR4 267 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 SLC41A2Q96JW4 573 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 KLHDC3Q9BQ90 382 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 ABHD6Q9BV23 337 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 NUDT9Q9BW91 350 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 PRMT8Q9NR22 394 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 PCDHB16Q9NRJ7 776 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DUX4Q9UBX2 424 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 GTF2A1LQ9UNN4 478 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 TMEM82A0PJX8 343 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 F8W036 122 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 H3BSH0 61 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 ST8SIA5O15466 376 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 PNPP00491 289 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 FBXO45P0C2W1 286 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 ACHEP22303 614 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 NR0B1P51843 470 aaKnown RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 GLO1Q04760 184 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
USP4-205ENST00000431357 FGL1Q08830 312 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 SFRP5Q5T4F7 317 aa10.16□□□□□ -0.78
USP4-205ENST00000431357 C1orf140Q5VVS0 124 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms