RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 ELOVL3Q9HB03 270 aa13.78□□□□□ -0.2
TGFB1-201ENST00000221930 EXOSC3Q9NQT5 275 aaKnown RBP13.78□□□□□ -0.2
TGFB1-201ENST00000221930 PIPOXQ9P0Z9 390 aa13.78□□□□□ -0.2
TGFB1-201ENST00000221930 EPHA6Q9UF33 1036 aa13.78□□□□□ -0.2
TGFB1-201ENST00000221930 TMEM150CB9EJG8 249 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 H0YIG0 161 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 XKRYO14609 159 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 DOK2O60496 412 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 IL12BP29460 328 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 UBE2MP61081 183 aaKnown RBP13.77□□□□□ -0.2
TGFB1-201ENST00000221930 ELOCQ15369 112 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 COL13A1Q5TAT6 717 aaPredicted RBP13.77□□□□□ -0.2
TGFB1-201ENST00000221930 OLFML2AQ68BL7 652 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 BIVMQ86UB2 503 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 EID2Q8N6I1 236 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 UXS1Q8NBZ7 420 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 METTL21AQ8WXB1 218 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 CCNL2Q96S94 520 aaPredicted RBP13.77□□□□□ -0.2
TGFB1-201ENST00000221930 NUDT9Q9BW91 350 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 CUTCQ9NTM9 273 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 STEAP1Q9UHE8 339 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 FREM2Q5SZK8 3169 aa13.77□□□□□ -0.2
TGFB1-201ENST00000221930 A0A1B0GTQ1 180 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 TMEM212A6NML5 194 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 M0R233 179 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 DDAH2O95865 285 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 PNPP00491 289 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 IGF2P01344 180 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 FREM3P0C091 2139 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 S100PP25815 95 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 PSMA6P60900 246 aaKnown RBP13.77□□□□□ -0.21
TGFB1-201ENST00000221930 EMC4Q5J8M3 183 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 MDGA2Q7Z553 956 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF227Q86WZ6 799 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 CADM4Q8NFZ8 388 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 OTOSQ8NHW6 89 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF721Q8TF20 911 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 C4orf45Q96LM5 186 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 OR51M1Q9H341 326 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 ETV7Q9Y603 341 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 CABIN1Q9Y6J0 2220 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 TRBV5-7A0A0A0MS05 114 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 CREBL2O60519 120 aaPredicted RBP13.77□□□□□ -0.21
TGFB1-201ENST00000221930 SLC16A7O60669 478 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 NDUFB6O95139 128 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 SIX6O95475 246 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 IGKV3-11P04433 115 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 EGR3Q06889 387 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 BIKQ13323 160 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 ACKR1Q16570 336 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 CHMP1BQ7LBR1 199 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 KDM8Q8N371 416 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 PLPP7Q8NBV4 271 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 MRI1Q9BV20 369 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 CHRNA10Q9GZZ6 450 aa13.77□□□□□ -0.21
TGFB1-201ENST00000221930 TLCD2A6NGC4 264 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 FRG2CA6NGY1 282 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 XRCC3O43542 346 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 RBBP9O75884 186 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 BGLAPP02818 100 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 IFNGR1P15260 489 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 CSRP1P21291 193 aaKnown RBP13.76□□□□□ -0.21
TGFB1-201ENST00000221930 POU3F4P49335 361 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 MRPS10P82664 201 aaKnown RBP13.76□□□□□ -0.21
TGFB1-201ENST00000221930 CSRP2Q16527 193 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 OR5M10Q6IEU7 315 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 RGS7BPQ6MZT1 257 aaPredicted RBP13.76□□□□□ -0.21
TGFB1-201ENST00000221930 C9orf40Q8IXQ3 194 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 STPG2Q8N412 459 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 OR4C16Q8NGL9 310 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 OR8S1Q8NH09 359 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 MCHR2Q969V1 340 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 ELMOD3Q96FG2 381 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 ZDHHC12Q96GR4 267 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 OR1F2PQ96R84 312 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 LAT2Q9GZY6 243 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
TGFB1-201ENST00000221930 TMEM14AQ9Y6G1 99 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 ABCA7Q8IZY2 2146 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 TRAV18A0A075B6X5 111 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 GGT3PA6NGU5 568 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 CTAG2O75638 210 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 SLC25A12O75746 678 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 RGS11O94810 467 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 WNT11O96014 354 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 RLN1P04808 185 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 SPARCP09486 303 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 NSDHLQ15738 373 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 OR1M1Q8NGA1 313 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 DVL3Q92997 716 aaPredicted RBP13.76□□□□□ -0.21
TGFB1-201ENST00000221930 GINS4Q9BRT9 223 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 TBL1XR1Q9BZK7 514 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 OR11A1Q9GZK7 315 aa13.76□□□□□ -0.21
TGFB1-201ENST00000221930 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 ARGFXA6NJG6 315 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 FGF2P09038 288 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 VSIG10L2P0DP72 767 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 CXCL2P19875 107 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms