RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 EN2P19622 333 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 HTR2CP28335 458 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 AGTR1P30556 359 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 RPS27P42677 84 aaKnown RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 PNLIPRP2P54317 469 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 GUCA2AQ02747 115 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 UBXN2BQ14CS0 331 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 SHHQ15465 462 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ODF4Q2M2E3 257 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 HLA-DQA1Q5Y7H0 255 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 HSD17B13Q7Z5P4 300 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 BIVMQ86UB2 503 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 EIF4E3Q8N5X7 224 aaKnown RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 OR4D10Q8NGI6 311 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 OR6S1Q8NH40 331 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CLIP3Q96DZ5 547 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 WDR89Q96FK6 387 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 TMEM138Q9NPI0 162 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CUTCQ9NTM9 273 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 MRPL22Q9NWU5 206 aaKnown RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CYP8B1Q9UNU6 501 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 SLC22A23A1A5C7 686 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 A8MUA0 341 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 A8MXK9 166 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 OR2T1O43869 369 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 PRKNO60260 465 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 DOK2O60496 412 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 SLC16A7O60669 478 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 KDM4BO94953 1096 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 RAB3DO95716 219 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 GPANK1O95872 356 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 HOXD4P09016 255 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 SPARCP09486 303 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 GLULP15104 373 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 PRKACBP22694 351 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 NUP62P37198 522 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 INSM1Q01101 510 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 SRSF4Q08170 494 aaKnown RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 FGL1Q08830 312 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 EBPQ15125 230 aaKnown RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 C2orf68Q2NKX9 166 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 C4orf46Q504U0 113 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 NDUFAF7Q7L592 441 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 C12orf45Q8N5I9 185 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 DAZLQ92904 295 aaKnown RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 FOXRED1Q96CU9 486 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 SEH1LQ96EE3 360 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 SLC41A2Q96JW4 573 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 TBL1XR1Q9BZK7 514 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 TTYH1Q9H313 450 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 SLC22A13Q9Y226 551 aa11.78□□□□□ -0.52
USB1-207ENST00000563149 COL5A1P20908 1838 aaPredicted RBP11.78□□□□□ -0.52
USB1-207ENST00000563149 TMED7-TICAM2A0A0A6YYA0 188 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 IGHV5-51A0A0C4DH38 117 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 TMEM82A0PJX8 343 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 OR6C76A6NM76 312 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 SIX6O95475 246 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 PNPP00491 289 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 CD74P04233 296 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 ISG15P05161 165 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 ACHEP22303 614 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 ADAM8P78325 824 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 EIF2B1Q14232 305 aaKnown RBP11.77□□□□□ -0.52
USB1-207ENST00000563149 TOMM34Q15785 309 aaPredicted RBP11.77□□□□□ -0.52
USB1-207ENST00000563149 C1orf100Q5SVJ3 147 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 SFRP5Q5T4F7 317 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 YOD1Q5VVQ6 348 aaPredicted RBP11.77□□□□□ -0.52
USB1-207ENST00000563149 ASPHD2Q6ICH7 369 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 OR7E24Q6IFN5 339 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 LPCAT3Q6P1A2 487 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 C11orf88Q6PI97 169 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 SLC35D2Q76EJ3 337 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 GRINAQ7Z429 371 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 ADGRE4PQ86SQ3 457 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 MARCH3Q86UD3 253 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 C17orf82Q86X59 251 aaPredicted RBP11.77□□□□□ -0.52
USB1-207ENST00000563149 PDZD9Q8IXQ8 264 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 OR5M9Q8NGP3 310 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 OR52N5Q8NH56 324 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 COQ8AQ8NI60 647 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 SLC25A36Q96CQ1 311 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 ZDHHC12Q96GR4 267 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 KLHDC3Q9BQ90 382 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 ABHD6Q9BV23 337 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 NUDT9Q9BW91 350 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 RTN4RQ9BZR6 473 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 SLC2A4RGQ9NR83 387 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 MSRAQ9UJ68 235 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 HHLA2Q9UM44 414 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 TMED7Q9Y3B3 224 aa11.77□□□□□ -0.52
USB1-207ENST00000563149 R4GMQ9 66 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms