RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TPSD1Q9BZJ3 242 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 WWTR1Q9GZV5 400 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 KCNN3Q9UGI6 736 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OPN4Q9UHM6 478 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 KIF25Q9UIL4 384 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 DHDHQ9UQ10 334 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 IGHV1OR15-9A0A0B4J2B8 117 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 A0A1W2PR77 199 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SLC22A23A1A5C7 686 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 A8MVM7 634 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 B8ZZF3 427 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SCO1O75880 301 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 WNT11O96014 354 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 CD3DP04234 171 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 ABCD3P28288 659 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SEC61A1P61619 476 aaKnown RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 ADAM8P78325 824 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SSBP1Q04837 148 aaKnown RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 DEFB133Q30KQ1 61 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 VWA2Q5GFL6 755 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 C1orf140Q5VVS0 124 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 TMEM225Q6GV28 225 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OR7E24Q6IFN5 339 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 CHMP1BQ7LBR1 199 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 CATSPERDQ86XM0 798 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 MUC20Q8N307 709 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 CLEC1AQ8NC01 280 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OR2AK2Q8NG84 335 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OR1J4Q8NGS1 313 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 GPX8Q8TED1 209 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 DAZLQ92904 295 aaKnown RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SLC25A28Q96A46 364 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 MSANTD3Q96H12 275 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 CCDC120Q96HB5 630 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 NKX3-1Q99801 234 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 ABHD6Q9BV23 337 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 RAB33BQ9H082 229 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 ATG5Q9H1Y0 275 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SLC2A4RGQ9NR83 387 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 HMSDA8MTL9 139 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 PLPP3O14495 311 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 RGS11O94810 467 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 IGHMP01871 453 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 S100A11P31949 105 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 MAP2K6P52564 334 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 RIDAP52758 137 aaKnown RBP9.96□□□□□ -0.82
HDAC9-228ENST00000524023 PNLIPRP2P54317 469 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 UBE2MP61081 183 aaKnown RBP9.96□□□□□ -0.82
HDAC9-228ENST00000524023 OC90Q02509 493 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-228ENST00000524023 EIF2B1Q14232 305 aaKnown RBP9.96□□□□□ -0.82
HDAC9-228ENST00000524023 TOMM20Q15388 145 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 NSDHLQ15738 373 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 ARHGAP40Q5TG30 622 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 GLT8D1Q68CQ7 371 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 STEAP1BQ6NZ63 245 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 SYT13Q7L8C5 426 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 MDGA2Q7Z553 956 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 OR1N1Q8NGS0 311 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 OR8S1Q8NH09 359 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 GPR119Q8TDV5 335 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 DVL3Q92997 716 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-228ENST00000524023 APMAPQ9HDC9 416 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF224Q9NZL3 707 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 LRP12Q9Y561 859 aa9.96□□□□□ -0.82
HDAC9-228ENST00000524023 A0A1W2PPC1 479 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 FADS1O60427 444 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 CD2P06729 351 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 FCER2P06734 321 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF35P13682 527 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 IGFBP3P17936 291 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 CD27P26842 260 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 MELKQ14680 651 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 HLXQ14774 488 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 MFSD13AQ14CX5 517 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 SFRP5Q5T4F7 317 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 TMEM65Q6PI78 240 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 TMUB2Q71RG4 321 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 SLC29A4Q7RTT9 530 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 PRSS58Q8IYP2 241 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 SLC38A6Q8IZM9 456 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 OR1L3Q8NH93 324 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 RBPMSQ93062 196 aaKnown RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 WBP1Q96G27 269 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ZNF587Q96SQ5 575 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 OR11A1Q9GZK7 315 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 CHST6Q9GZX3 395 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 PRMT8Q9NR22 394 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 RDH8Q9NYR8 311 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 TAS2R4Q9NYW5 299 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 CKLFQ9UBR5 152 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 COPS7AQ9UBW8 275 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ARID1BQ8NFD5 2236 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-228ENST00000524023 SPEGQ15772 3267 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 ASXL3Q9C0F0 2248 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 FER1L5A0AVI2 2057 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 RHPN2P1A8MT19 583 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 LMO7DNF2Z398 122 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 F5H5P2 479 aa9.95□□□□□ -0.82
HDAC9-228ENST00000524023 GOSR2O14653 212 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms