RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 C1QCP02747 245 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 SNRPAP09012 282 aaKnown RBP6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CD28P10747 220 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CPEP16870 476 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CD33P20138 364 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CCNOP22674 350 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 AHCYP23526 432 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 STOMP27105 288 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 PHBP35232 272 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 APLNRP35414 380 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 PSMB10P40306 273 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 ETV4P43268 484 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CSNK1A1P48729 337 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 HPCAP84074 193 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 PLP2Q04941 152 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 MAPK11Q15759 364 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 UGT3A2Q3SY77 523 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 NKAPLQ5M9Q1 402 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 LYPD2Q6UXB3 125 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 LRRC74BQ6ZQY2 392 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 NLRC3Q7RTR2 1065 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 SLC16A14Q7RTX9 510 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 PXKQ7Z7A4 578 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CLIP4Q8N3C7 705 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 SPERTQ8NA61 448 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 SCCPDHQ8NBX0 429 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 RBM15BQ8NDT2 890 aaKnown RBP6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 VPS37AQ8NEZ2 397 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 OR2Z1Q8NG97 314 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 VANGL1Q8TAA9 524 aaPredicted RBP6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 WIPF2Q8TF74 440 aaPredicted RBP6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CCDC126Q96EE4 140 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 NAPGQ99747 312 aaPredicted RBP6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 NINJ2Q9NZG7 142 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 EIF3KQ9UBQ5 218 aaKnown RBP6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 GIMAP2Q9UG22 337 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 FAM96BQ9Y3D0 163 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 CHST2Q9Y4C5 530 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 IGKV1D-42A0A075B6H8 117 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 MEGF11A6BM72 1044 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 BTBD17A6NE02 478 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 E9PQ18 207 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 IFNL4K9M1U5 179 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 RNASET2O00584 256 aaKnown RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 PEX11AO75192 247 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 CYB5R3P00387 301 aaPredicted RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 VSIG10L2P0DP72 767 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 NQO1P15559 274 aaKnown RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 NCF2P19878 526 aaPredicted RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 CBLP22681 906 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 TNFSF4P23510 183 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 RPL4P36578 427 aaKnown RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 DNAJB13P59910 316 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 PPP1CBP62140 327 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 PGS1Q32NB8 556 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 DMRTC1Q5HYR2 192 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 PABPC1L2AQ5JQF8 200 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 ZBTB37Q5TC79 503 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 METTL11BQ5VVY1 283 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 CD276Q5ZPR3 534 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 KANK2Q63ZY3 851 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 OR4F3Q6IEY1 312 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 UNQ6126/PRO20091Q6UXV3 157 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 ZYG11AQ6WRX3 759 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 ZNF836Q6ZNA1 936 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 RFPL4BQ6ZWI9 263 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 RNF144BQ7Z419 303 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 CALHM3Q86XJ0 350 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 VRK2Q86Y07 508 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 PDZD9Q8IXQ8 264 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 SCAIQ8N9R8 606 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 HIPK4Q8NE63 616 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 OR5R1Q8NH85 324 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 ZNF420Q8TAQ5 688 aaPredicted RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 ABHD4Q8TB40 342 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 NPRL2Q8WTW4 380 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 MAP6Q96JE9 813 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 OR2V2Q96R30 315 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 CITED2Q99967 270 aaPredicted RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 SEMA6AQ9H2E6 1030 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 MAN2C1Q9NTJ4 1040 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 NOP53Q9NZM5 478 aaKnown RBP6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 KLHL14Q9P2G3 628 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 EMCNQ9ULC0 261 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 LYSTQ99698 3801 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 RYR1P21817 5038 aa6.01□□□□□ -1.45
SPTLC1-205ENST00000477888 TRAV36DV7A0A075B6V5 113 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 EXOC1LA0A1B0GW35 172 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 C5orf49A4QMS7 147 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 GOLGA6L6A8MZA4 724 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 PLPP3O14495 311 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 SURF4O15260 269 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 TIMM8AO60220 97 aaPredicted RBP6□□□□□ -1.45
SPTLC1-205ENST00000477888 ZFPL1O95159 310 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 GHRHP01286 108 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 FGF4P08620 206 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 FBP1P09467 338 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 MYL2P10916 166 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 PMELP40967 661 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 PAFAH1B1P43034 410 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms