RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PRR20BP86481 221 aa8.79□□□□□ -1
RTN4-211ENST00000438462 PRR20AP86496 221 aa8.79□□□□□ -1
RTN4-211ENST00000438462 PTGR1Q14914 329 aa8.79□□□□□ -1
RTN4-211ENST00000438462 HAGHQ16775 308 aa8.79□□□□□ -1
RTN4-211ENST00000438462 SLC36A2Q495M3 483 aa8.79□□□□□ -1
RTN4-211ENST00000438462 ZNF385BQ569K4 471 aa8.79□□□□□ -1
RTN4-211ENST00000438462 C1orf140Q5VVS0 124 aa8.79□□□□□ -1
RTN4-211ENST00000438462 NCR3LG1Q68D85 454 aa8.79□□□□□ -1
RTN4-211ENST00000438462 RPS27LQ71UM5 84 aaKnown RBP8.79□□□□□ -1
RTN4-211ENST00000438462 ATG16L2Q8NAA4 619 aa8.79□□□□□ -1
RTN4-211ENST00000438462 OR6N1Q8NGY5 312 aa8.79□□□□□ -1
RTN4-211ENST00000438462 SLC25A36Q96CQ1 311 aa8.79□□□□□ -1
RTN4-211ENST00000438462 LRR1Q96L50 414 aa8.79□□□□□ -1
RTN4-211ENST00000438462 EXOSC3Q9NQT5 275 aaKnown RBP8.79□□□□□ -1
RTN4-211ENST00000438462 PCTPQ9UKL6 214 aa8.79□□□□□ -1
RTN4-211ENST00000438462 LYVE1Q9Y5Y7 322 aa8.79□□□□□ -1
RTN4-211ENST00000438462 C5orf49A4QMS7 147 aa8.78□□□□□ -1
RTN4-211ENST00000438462 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
RTN4-211ENST00000438462 CLDN24A6NM45 220 aa8.78□□□□□ -1
RTN4-211ENST00000438462 FTCDNL1E5RQL4 147 aa8.78□□□□□ -1
RTN4-211ENST00000438462 DVL1O14640 695 aa8.78□□□□□ -1
RTN4-211ENST00000438462 FARS2O95363 451 aaKnown RBP8.78□□□□□ -1
RTN4-211ENST00000438462 IRF2P14316 349 aa8.78□□□□□ -1
RTN4-211ENST00000438462 GP9P14770 177 aa8.78□□□□□ -1
RTN4-211ENST00000438462 NCF2P19878 526 aaPredicted RBP8.78□□□□□ -1
RTN4-211ENST00000438462 EFNA1P20827 205 aaPredicted RBP8.78□□□□□ -1
RTN4-211ENST00000438462 AHCYP23526 432 aa8.78□□□□□ -1
RTN4-211ENST00000438462 CXCR1P25024 350 aa8.78□□□□□ -1
RTN4-211ENST00000438462 STOMP27105 288 aa8.78□□□□□ -1
RTN4-211ENST00000438462 SLC6A1P30531 599 aa8.78□□□□□ -1
RTN4-211ENST00000438462 PRKAR1BP31321 381 aa8.78□□□□□ -1
RTN4-211ENST00000438462 CCT3P49368 545 aaKnown RBP8.78□□□□□ -1
RTN4-211ENST00000438462 HSF2Q03933 536 aa8.78□□□□□ -1
RTN4-211ENST00000438462 SPA17Q15506 151 aa8.78□□□□□ -1
RTN4-211ENST00000438462 FAM153CQ494X1 144 aa8.78□□□□□ -1
RTN4-211ENST00000438462 SFRP4Q6FHJ7 346 aaPredicted RBP8.78□□□□□ -1
RTN4-211ENST00000438462 METTL2BQ6P1Q9 378 aaKnown RBP8.78□□□□□ -1
RTN4-211ENST00000438462 FRMD7Q6ZUT3 714 aa8.78□□□□□ -1
RTN4-211ENST00000438462 SLC16A14Q7RTX9 510 aa8.78□□□□□ -1
RTN4-211ENST00000438462 PIGWQ7Z7B1 504 aa8.78□□□□□ -1
RTN4-211ENST00000438462 HMGN2P46Q86SG4 172 aa8.78□□□□□ -1
RTN4-211ENST00000438462 LY6G5BQ8NDX9 201 aa8.78□□□□□ -1
RTN4-211ENST00000438462 VPS37AQ8NEZ2 397 aa8.78□□□□□ -1
RTN4-211ENST00000438462 OR5D16Q8NGK9 328 aa8.78□□□□□ -1
RTN4-211ENST00000438462 GPR22Q99680 433 aa8.78□□□□□ -1
RTN4-211ENST00000438462 PITX2Q99697 317 aa8.78□□□□□ -1
RTN4-211ENST00000438462 WACQ9BTA9 647 aa8.78□□□□□ -1
RTN4-211ENST00000438462 TMEM38BQ9NVV0 291 aa8.78□□□□□ -1
RTN4-211ENST00000438462 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
RTN4-211ENST00000438462 IFNKQ9P0W0 207 aa8.78□□□□□ -1
RTN4-211ENST00000438462 CAPN7Q9Y6W3 813 aa8.78□□□□□ -1
RTN4-211ENST00000438462 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 A8MVM7 634 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 CCL24O00175 119 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 MANBAO00462 879 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 INHBAP08476 426 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 TFPTP0C1Z6 253 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 SPNP16150 400 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 FASP25445 335 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 SRP9P49458 86 aaKnown RBP8.77□□□□□ -1.01
RTN4-211ENST00000438462 CEBPDP49716 269 aaPredicted RBP8.77□□□□□ -1.01
RTN4-211ENST00000438462 TP53BP2Q13625 1128 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 PABPC1L2AQ5JQF8 200 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 TMEM65Q6PI78 240 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 CMC1Q7Z7K0 106 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 SYCE1Q8N0S2 351 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 PTGR2Q8N8N7 351 aaPredicted RBP8.77□□□□□ -1.01
RTN4-211ENST00000438462 NPEPL1Q8NDH3 523 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 SLC26A10Q8NG04 563 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 OR4K5Q8NGD3 323 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 FAM46AQ96IP4 442 aaKnown RBP8.77□□□□□ -1.01
RTN4-211ENST00000438462 POM121L2Q96KW2 1035 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 PPP1R3EQ9H7J1 279 aa8.77□□□□□ -1.01
RTN4-211ENST00000438462 FAF1Q9UNN5 650 aaPredicted RBP8.77□□□□□ -1.01
RTN4-211ENST00000438462 POLR3HQ9Y535 204 aaPredicted RBP8.77□□□□□ -1.01
RTN4-211ENST00000438462 LOC100509620A0A075B734 347 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 MS4A18H0YCH9 400 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 FAM20BO75063 409 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 ENTPD5O75356 428 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 STX11O75558 287 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 HLA-DOBP13765 273 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 ETS2P15036 469 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 KITLGP21583 273 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 HTR6P50406 440 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 ERFP50548 548 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 MFGE8Q08431 387 aaPredicted RBP8.76□□□□□ -1.01
RTN4-211ENST00000438462 TAF11Q15544 211 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 KCNJ8Q15842 424 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 DEFB136Q30KP8 78 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 C11orf91Q3C1V1 193 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 CBLL1Q75N03 491 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 DPPA2Q7Z7J5 298 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 ARMC8Q8IUR7 673 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 UEVLDQ8IX04 471 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 PPIL6Q8IXY8 311 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 RHEBL1Q8TAI7 183 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 GRK7Q8WTQ7 553 aa8.76□□□□□ -1.01
RTN4-211ENST00000438462 CNOT9Q92600 299 aaKnown RBP8.76□□□□□ -1.01
RTN4-211ENST00000438462 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms