RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 FHL1Q13642 323 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 KRBOX4Q5JUW0 171 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 DGAT2L6Q6ZPD8 337 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 MDGA2Q7Z553 956 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 KCNRGQ8N5I3 272 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 POMGNT2Q8NAT1 580 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 MKKSQ9NPJ1 570 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-209ENST00000576012 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 HAO2Q9NYQ3 351 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 TNFSF18Q9UNG2 199 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 A0A0B4J2E0 115 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 A0A1B0GX12 115 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 A0A1W2PPE3 182 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 ZNF208O43345 1280 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 CTXN1P60606 82 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 GLYATL3Q5SZD4 288 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
SCARF1-209ENST00000576012 GRASPQ7Z6J2 395 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-209ENST00000576012 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 CCDC107Q8WV48 283 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 CST11Q9H112 138 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 ZNF736B4DX44 427 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-209ENST00000576012 SLC31A1O15431 190 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 ZNF749O43361 778 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 SERPINA5P05154 406 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 MRPS10P82664 201 aaKnown RBP13.18□□□□□ -0.3
SCARF1-209ENST00000576012 PEA15Q15121 130 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 KLHL26Q53HC5 615 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 EID2Q8N6I1 236 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 SFXN1Q9H9B4 322 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 ZFP57Q9NU63 452 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 CSAG2Q9Y5P2 127 aa13.18□□□□□ -0.3
SCARF1-209ENST00000576012 SPTBN5Q9NRC6 3674 aaKnown RBP13.18□□□□□ -0.3
SCARF1-209ENST00000576012 HIDE1A8MVS5 230 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 STMND1H3BQB6 276 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 SSX5O60225 188 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR10H2O60403 315 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 FBXO24O75426 580 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 WNT11O96014 354 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 RHOP08100 348 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 TLX1P31314 330 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ILF3Q12906 894 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ERV3-1Q14264 604 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 CLINT1Q14677 625 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 GFOD2Q3B7J2 385 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 SLC39A5Q6ZMH5 540 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 CLEC1AQ8NC01 280 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR52R1Q8NGF1 315 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 COMMD4Q9H0A8 199 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 PRMT8Q9NR22 394 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ZNF275Q9NSD4 429 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 MIOXQ9UGB7 285 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 DENND4AQ7Z401 1863 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 MPDZO75970 2070 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 METTL12A8MUP2 240 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 EML2O95834 649 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ERGP11308 486 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 NME2P22392 152 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR2B8PP59922 312 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 FAM109BQ6ICB4 259 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ACOT7LQ6ZUV0 252 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR51A2Q8NGJ7 313 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR4A4PQ8NGN8 299 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR1J4Q8NGS1 313 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR2G2Q8NGZ5 317 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 POTEKPQ9BYX7 375 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 SYT4Q9H2B2 425 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 KCNG2Q9UJ96 466 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 LY86O95711 162 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 PMS2P2O95744 297 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 CMPK1P30085 196 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 MAP3K8P41279 467 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 RAB11BQ15907 218 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ANKRD16Q6P6B7 361 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ADAD2Q8NCV1 583 aaKnown RBP13.17□□□□□ -0.3
SCARF1-209ENST00000576012 OR5M8Q8NGP6 311 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 MOGAT1Q96PD6 335 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 CLCC1Q96S66 551 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 GHRLQ9UBU3 117 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 SERGEFQ9UGK8 458 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 VSIG4Q9Y279 399 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 ENTPD2Q9Y5L3 495 aa13.17□□□□□ -0.3
SCARF1-209ENST00000576012 SEC16AO15027 2179 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 UPK3AO75631 287 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 TACSTD2P09758 323 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 SLC35G6P0C7Q6 338 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 ADH5P11766 374 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 SDHAP31040 664 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 CD80P33681 288 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 C9orf152Q5JTZ5 239 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 ZNF704Q6ZNC4 412 aaPredicted RBP13.16□□□□□ -0.3
SCARF1-209ENST00000576012 NUDCD2Q8WVJ2 157 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms