RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ZDHHC8Q9ULC8 765 aa8.4□□□□□ -1.06
CALCOCO2-227ENST00000575560 TRIM33Q9UPN9 1127 aa8.4□□□□□ -1.06
CALCOCO2-227ENST00000575560 LOC100509620A0A075B734 347 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 A0A1B0GUS0 222 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 C5orf58C9J3I9 102 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 F5H0A9 414 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 HDAC3O15379 428 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR6A2O95222 327 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 PLATP00750 562 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 STOMP27105 288 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 APLNRP35414 380 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 MTNR1AP48039 350 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF133P52736 654 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 PAX2Q02962 417 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 BST1Q10588 318 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 CDK5R2Q13319 367 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 MPP2Q14168 576 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 MELKQ14680 651 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF74Q16587 644 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 TMEM155Q4W5P6 130 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 PABPC1L2AQ5JQF8 200 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 C6orf10Q5SRN2 563 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF362Q5T0B9 420 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 SPATA46Q5T0L3 261 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 HHATQ5VTY9 493 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 REEP3Q6NUK4 255 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 RHOUQ7L0Q8 258 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 C1orf174Q8IYL3 243 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 C10orf111Q8N326 155 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 LRRC18Q8N456 261 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 KLHL36Q8N4N3 616 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR52E2Q8NGJ4 325 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 NFKBIDQ8NI38 313 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 SLC25A40Q8TBP6 338 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 GEMIN6Q8WXD5 167 aaKnown RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 DCLRE1CQ96SD1 692 aaKnown RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 DIRC2Q96SL1 478 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 SEPHS2Q99611 448 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 CITED1Q99966 193 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 TMEM109Q9BVC6 243 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 SPATA5L1Q9BVQ7 753 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR2J1Q9GZK6 312 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 RAD21L1Q9H4I0 556 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 PRDM13Q9H4Q3 707 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 SSU72Q9NP77 194 aaKnown RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 TMEM106BQ9NUM4 274 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZIM2Q9NZV7 527 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 CGGBP1Q9UFW8 167 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 NBEAL2Q6ZNJ1 2754 aa8.39□□□□□ -1.07
CALCOCO2-227ENST00000575560 PRORSD1PA6NEY8 169 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 TRPC5OSA6NMA1 111 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 RNF13O43567 381 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 ICMTO60725 284 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 LYPD3O95274 346 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 KNG1P01042 644 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 CCNOP22674 350 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 PCGF2P35227 344 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF84P51523 738 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 POLR2JP52435 117 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 RGS8P57771 180 aaPredicted RBP8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 NCALDP61601 193 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 CDK6Q00534 326 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF613Q6PF04 617 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 SLC2A7Q6PXP3 512 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 SPATC1Q76KD6 591 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 KRT73Q86Y46 540 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 SPICQ8N5J4 248 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 KIR3DL3Q8N743 410 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF283Q8N7M2 679 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR9I1Q8NGQ6 314 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 UPRTQ96BW1 309 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 MAELQ96JY0 434 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZNF347Q96SE7 839 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 MMP27Q9H306 513 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 EVA1AQ9H8M9 152 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 SIAEQ9HAT2 523 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 MSL2Q9HCI7 577 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 SLC25A37Q9NYZ2 338 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 EIF3KQ9UBQ5 218 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 GMEB1Q9Y692 573 aa8.38□□□□□ -1.07
CALCOCO2-227ENST00000575560 C5orf49A4QMS7 147 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 CENPBD1B2RD01 187 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 H3BSA7 217 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 HOXA3O43365 443 aaPredicted RBP8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 CHP2O43745 196 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 FMO6PO60774 539 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 SNNO75324 88 aaPredicted RBP8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 GPANK1O95872 356 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 CH25HO95992 272 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 NGFP01138 241 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 IGHG1P01857 330 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 THY1P04216 161 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 WNT2P09544 360 aa8.37□□□□□ -1.07
CALCOCO2-227ENST00000575560 ASAH2BP0C7U1 165 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms