RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 NAT8LQ8N9F0 302 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR4D6Q8NGJ1 314 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR56B4Q8NH76 319 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MARC2Q969Z3 335 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF681Q96N22 645 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SMOXQ9NWM0 555 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 A6NHS1 94 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 PPP5D1E7EU14 171 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 M0QZ24 198 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 RPL24P83731 157 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 POU3F1Q03052 451 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 Q1RN00 199 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ALKAL2Q6UX46 152 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CEACAM19Q7Z692 300 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ANKRD37Q7Z713 158 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MARCH3Q86UD3 253 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 KCNRGQ8N5I3 272 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR2D3Q8NGH3 330 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CDS1Q92903 461 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CPNE4Q96A23 557 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 PYURFQ96I23 114 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 NOL4LQ96MY1 436 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SMIM14Q96QK8 99 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 NMNAT2Q9BZQ4 307 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SHARPINQ9H0F6 387 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 PIGMQ9H3S5 423 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 HSPE1-MOB4S4R3N1 261 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MYH10P35580 1976 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 UNC119BA6NIH7 251 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SOCS2O14508 198 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 KLF11O14901 512 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SCAMP2O15127 329 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 FZD7O75084 574 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MOSPD3O75425 235 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 LALBAP00709 142 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 GABRR1P24046 479 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SRP9P49458 86 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 LIM2P55344 173 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 EMX2Q04743 252 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 TBR1Q16650 682 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF718Q3SXZ3 478 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SLC35F1Q5T1Q4 408 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 AQP11Q8NBQ7 271 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR5H2Q8NGV7 314 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR1S1Q8NH92 325 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF418Q8TF45 676 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CMTM3Q96MX0 182 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SORBS1Q9BX66 1292 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SLCO5A1Q9H2Y9 848 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 HIF1ANQ9NWT6 349 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 KLHL21Q9UJP4 597 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 QSER1Q2KHR3 1735 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 TMEM235A6NFC5 223 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 OPN1SWP03999 348 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 HLA-DOBP13765 273 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CELP19835 753 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 RAB5AP20339 215 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 FCARP24071 287 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 DRD3P35462 400 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 HCCSP53701 268 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CDKN2DP55273 166 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CSNK1G2P78368 415 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 PIGFQ07326 219 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 NKG7Q16617 165 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TEX261Q6UWH6 196 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF546Q86UE3 836 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 NHLRC2Q8NBF2 726 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 FNDC9Q8TBE3 224 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CD200R1Q8TD46 325 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 DYRK2Q92630 601 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 PIGTQ969N2 578 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ZBTB8AQ96BR9 441 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 RTP4Q96DX8 246 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MGLLQ99685 303 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 VAMP8Q9BV40 100 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 KATNB1Q9BVA0 655 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 UCK1Q9HA47 277 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 INIPQ9NRY2 104 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 RYDENQ9NUL5 291 aaKnown RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ZIM2Q9NZV7 527 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 OR14J1Q9UGF5 321 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 U3KQ87 197 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 A0A1B0GVG6 124 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TRIM77I1YAP6 450 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 M0R143 59 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 NDUFS8O00217 210 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 GAAP10253 952 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CPT2P23786 658 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 PIGAP37287 484 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ARL6IP1Q15041 203 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 RAB6CQ53S08 254 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TEX26Q8N6G2 289 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SYT14Q8NB59 555 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SFXN5Q8TD22 340 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 NUDT8Q8WV74 236 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 AKR1E2Q96JD6 320 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 OR52B2Q96RD2 323 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SRRQ9GZT4 340 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms