RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CT45A8P0DMV1 189 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CT45A9P0DMV2 189 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CDH2P19022 906 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CFL1P23528 166 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OTX1P32242 354 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PYCR1P32322 319 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LSP1P33241 339 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 DDOSTP39656 456 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CETN2P41208 172 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR3A1P47881 315 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OSTNP61366 133 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF415Q09FC8 603 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KCNJ11Q14654 390 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PTGR1Q14914 329 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MAPRE2Q15555 327 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 VPS26BQ4G0F5 336 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC40Q4G0X9 1142 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CT45A2Q5DJT8 189 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TNFAIP8L3Q5GJ75 292 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SPANXN3Q5MJ09 141 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR52W1Q6IF63 320 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM45BPQ6NSW5 357 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 DNAJC24Q6P3W2 148 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NLRC3Q7RTR2 1065 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LINC00596Q86U02 117 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GSPT2Q8IYD1 628 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GAPTQ8N292 157 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KLHL36Q8N4N3 616 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR4Q3Q8NH05 313 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ANGPTL6Q8NI99 470 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM45AQ8TCE6 357 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ABHD3Q8WU67 409 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 APH1AQ96BI3 265 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MMABQ96EY8 250 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC115Q96NT0 180 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF300Q96RE9 604 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CDRT15Q96T59 188 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ACAT2Q9BWD1 397 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TXLNGYQ9BZA5 131 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF436Q9C0F3 470 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KLK15Q9H2R5 256 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZDHHC18Q9NUE0 388 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ACOXLQ9NUZ1 547 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PLA2G2DQ9UNK4 145 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 AMMECR1Q9Y4X0 333 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TNPO3Q9Y5L0 923 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 A0A1W2PR80 420 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 EFCAB8A8MWE9 144 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TRAPPC2LH3BP13 241 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 K7EMT4 169 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 AIM2O14862 343 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLC22A2O15244 555 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SPRY2O43597 315 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 GPRIN2O60269 458 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SH3BGRLO75368 114 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DNAJC8O75937 253 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR4A8P0C604 315 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FOLR2P14207 255 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TCP1P17987 556 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MAGP20916 626 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MPZP25189 248 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ETV6P41212 452 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 GCLMP48507 274 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 APOC4P55056 127 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DNAJB13P59910 316 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 KRTAP10-8P60410 259 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FAM27E3Q08E93 113 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SKP2Q13309 424 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DAG1Q14118 895 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ABRAXAS2Q15018 415 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ARHGAP11BQ3KRB8 267 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF542PQ5EBM4 170 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DNLZQ5SXM8 178 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 C6orf163Q5TEZ5 329 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MORN5Q5VZ52 161 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 STUMQ69YW2 141 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR4C11Q6IEV9 310 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 WDR93Q6P2C0 686 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 Q6ZRN7 208 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FKBP9P1Q75LS8 142 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF571Q7Z3V5 609 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 GLT6D1Q7Z4J2 308 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 WDR53Q7Z5U6 358 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PATL1Q86TB9 770 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 IQCF2Q8IXL9 164 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PRR22Q8IZ63 422 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MMGT1Q8N4V1 131 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZIC4Q8N9L1 334 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TC2NQ8N9U0 490 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLC16A11Q8NCK7 471 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR10D3Q8NH80 312 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 C17orf50Q8WW18 174 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 RAPGEF5Q92565 580 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 KLK6Q92876 244 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FLYWCH2Q96CP2 140 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 LINC00526Q96FQ7 95 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 EGLN2Q96KS0 407 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TTC25Q96NG3 672 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OXGR1Q96P68 337 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms