RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SLITRK2Q9H156 845 aa7.42□□□□□ -1.22
CSDE1-214ENST00000530886 RGCCQ9H4X1 137 aa7.42□□□□□ -1.22
CSDE1-214ENST00000530886 CNIH4Q9P003 139 aa7.42□□□□□ -1.22
CSDE1-214ENST00000530886 TAAR2Q9P1P5 351 aa7.42□□□□□ -1.22
CSDE1-214ENST00000530886 A0A087WWC5 75 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 A0A1B0GW64 132 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 J3QLW9 94 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 BHLHE40O14503 412 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ITGB1BP1O14713 200 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 GMFGO60234 142 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BKO60814 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 DNAJB6O75190 326 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 CH25HO95992 272 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BJP06899 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 MMP3P08254 477 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SOD3P08294 240 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF19P17023 458 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BOP23527 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ZBTB25P24278 435 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BBP33778 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 AKR1C3P42330 323 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 CCL23P55773 120 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 PCBP4P57723 403 aaKnown RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BDP58876 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 RPS23P62266 143 aaKnown RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BCP62807 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ST3GAL3Q11203 375 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SLC10A1Q14973 349 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST2H2BEQ16778 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 C9orf64Q5T6V5 341 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 CRTC1Q6UUV9 634 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 COMMD6Q7Z4G1 85 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 THOC6Q86W42 341 aaKnown RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF227Q86WZ6 799 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 VRK2Q86Y07 508 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 DND1Q8IYX4 353 aaKnown RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 OR13C3Q8NGS6 347 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 MAFIPQ8WZ33 124 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BHQ93079 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 F2RL3Q96RI0 385 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BNQ99877 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HIST1H2BMQ99879 126 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SUCNR1Q9BXA5 334 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 C1QTNF2Q9BXJ5 285 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ASB8Q9H765 288 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ZFYVE1Q9HBF4 777 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 CHTOPQ9Y3Y2 248 aaKnown RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 TRDCB7Z8K6 153 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 TAAR5O14804 337 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 P2RX6O15547 441 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 TGOLN2O43493 480 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 OR1F1O43749 312 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 CKBP12277 381 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF25P17030 456 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-214ENST00000530886 PSMB6P28072 239 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 HAGHQ16775 308 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 PLEKHS1Q5SXH7 462 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SDHAF4Q5VUM1 108 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 STEAP1BQ6NZ63 245 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ANKRD16Q6P6B7 361 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 RPTNQ6XPR3 784 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 MBOAT2Q6ZWT7 520 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 NXPE1Q8N323 547 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 KREMEN2Q8NCW0 462 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 OR4E2Q8NGC2 313 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 OR14A2Q96R54 314 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SNHG12Q9BXW3 62 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SLC6A16Q9GZN6 736 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 IL26Q9NPH9 171 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 SLC17A5Q9NRA2 495 aa7.41□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF821O75541 412 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 TGFB1P01137 390 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 G0S2P27469 103 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ITPKBP27987 946 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 PDX1P52945 283 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ACTBP60709 375 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 STXBP1P61764 594 aaKnown RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 RPS13P62277 151 aaKnown RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ACTG1P63261 375 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 MC1RQ01726 317 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 MLC1Q15049 377 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 OR7A5Q15622 319 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ISXQ2M1V0 245 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 MOGAT2Q3SYC2 334 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 LYG2Q86SG7 212 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SLC25A42Q86VD7 318 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 FJX1Q86VR8 437 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SECTM1Q8WVN6 248 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ZBTB8AQ96BR9 441 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 NTNG2Q96CW9 530 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 RCC1LQ96I51 464 aaKnown RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 FAM83CQ9BQN1 747 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 RNF126Q9BV68 326 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 RHBGQ9H310 441 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SMDT1Q9H4I9 107 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 TRPV4Q9HBA0 871 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SLC2A8Q9NY64 477 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 LHX3Q9UBR4 397 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms