RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MED20Q9H944 212 aa10.89□□□□□ -0.67
TRAIP-209ENST00000488860 RPRD1BQ9NQG5 326 aaKnown RBP10.89□□□□□ -0.67
TRAIP-209ENST00000488860 SLC7A10Q9NS82 523 aa10.89□□□□□ -0.67
TRAIP-209ENST00000488860 ASB6Q9NWX5 421 aa10.89□□□□□ -0.67
TRAIP-209ENST00000488860 GLTPQ9NZD2 209 aa10.89□□□□□ -0.67
TRAIP-209ENST00000488860 SLC5A6Q9Y289 635 aa10.89□□□□□ -0.67
TRAIP-209ENST00000488860 SLC22A23A1A5C7 686 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 OR6C65A6NJZ3 312 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF587BE7ETH6 402 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 H0YJX3 145 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 IL18BPO95998 194 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 QDPRP09417 244 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 NR2C1P13056 603 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 CHRNB4P30926 498 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 CENPAP49450 140 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 PCYT1AP49585 367 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 IL5RAQ01344 420 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 FAPQ12884 760 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 KEAP1Q14145 624 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 PLBD1Q6P4A8 553 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 CXXC5Q7LFL8 322 aaKnown RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 LIX1LQ8IVB5 337 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 DEPDC4Q8N2C3 294 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF610Q8N9Z0 462 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 RELL2Q8NC24 303 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 TMEM54Q969K7 222 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 FOXN4Q96NZ1 517 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 IL4I1Q96RQ9 567 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF184Q99676 751 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 APOL4Q9BPW4 351 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF629Q9UEG4 869 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ERRFI1Q9UJM3 462 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 FOXD3Q9UJU5 478 aaPredicted RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 NDRG4Q9ULP0 352 aaKnown RBP10.88□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF462Q96JM2 2506 aa10.88□□□□□ -0.67
TRAIP-209ENST00000488860 A0A1W2PPL8 197 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 OR6C68A6NDL8 312 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 FAM171A2A8MVW0 826 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CENPBD1B2RD01 187 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 H0YAE9 185 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 SLC16A6O15403 523 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 TLX2O43763 284 aaPredicted RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 SLC16A7O60669 478 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 ZG16O60844 167 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 SEC14L2O76054 403 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 GYPBP06028 91 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CLUP10909 449 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CD8BP10966 210 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 PLA2G2AP14555 144 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 PYCR1P32322 319 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 ADARB1P78563 741 aaKnown RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CEACAM16Q2WEN9 425 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 KLHL12Q53G59 568 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF691Q5VV52 312 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 FBXW9Q5XUX1 488 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 DNM1P34Q6PK57 102 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 LINGO2Q7L985 606 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 ABHD12BQ7Z5M8 362 aaPredicted RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 NPEPL1Q8NDH3 523 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 SETD9Q8NE22 299 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 PROKR2Q8NFJ6 384 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 TMEM163Q8TC26 289 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CA5BP1Q8WTZ4 195 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 ASB5Q8WWX0 329 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 MCHR2Q969V1 340 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 LRR1Q96L50 414 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 TSSK2Q96PF2 358 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 RBP7Q96R05 134 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 RBM24Q9BX46 236 aaKnown RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 MRPL13Q9BYD1 178 aaKnown RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 LINC00470Q9BZP3 86 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 NUAK2Q9H093 628 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CRLF2Q9HC73 371 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 GPR35Q9HC97 309 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 HINT3Q9NQE9 182 aaKnown RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 PLSCR4Q9NRQ2 329 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 RASSF1Q9NS23 344 aa10.87□□□□□ -0.67
TRAIP-209ENST00000488860 VSX1Q9NZR4 365 aaPredicted RBP10.87□□□□□ -0.67
TRAIP-209ENST00000488860 CACNA1CQ13936 2221 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 HCFC1P51610 2035 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 IGKV1D-43A0A0B4J1Z2 117 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 E9PQ18 207 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 CGAP01215 116 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 GNAO1P09471 354 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 CTLA4P16410 223 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF84P51523 738 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
TRAIP-209ENST00000488860 RPS7P62081 194 aaKnown RBP10.86□□□□□ -0.67
TRAIP-209ENST00000488860 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 BEND4Q6ZU67 534 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 BCDIN3DQ7Z5W3 292 aaKnown RBP10.86□□□□□ -0.67
TRAIP-209ENST00000488860 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.86□□□□□ -0.67
TRAIP-209ENST00000488860 MRGPRGQ86SM5 289 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms