RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 DHHO43323 396 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 LILRA1O75019 489 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 ENTPD5O75356 428 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 IGF2P01344 180 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 MT-ND1P03886 318 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 VIMP08670 466 aaKnown RBP13.16□□□□□ -0.3
VTI1A-203ENST00000472892 QDPRP09417 244 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 FUT1P19526 365 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 RBM34P42696 430 aaKnown RBP13.16□□□□□ -0.3
VTI1A-203ENST00000472892 GALK2Q01415 458 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 KLF10Q13118 480 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 RIN1Q13671 783 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 HIST3H3Q16695 136 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 ERICH5Q6P6B1 374 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 NKAIN4Q8IVV8 208 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 TMEM158Q8WZ71 300 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 HPS1Q92902 700 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 SEPHS2Q99611 448 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 MRPL13Q9BYD1 178 aaKnown RBP13.16□□□□□ -0.3
VTI1A-203ENST00000472892 MS4A5Q9H3V2 200 aa13.16□□□□□ -0.3
VTI1A-203ENST00000472892 LRP5LA4QPB2 252 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 BBIP1A8MTZ0 92 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 CENPBD1B2RD01 187 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 BLOC1S5-TXNDC5H3BN57 136 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-203ENST00000472892 OR5F1O95221 314 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 TGFAP01135 160 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 IGHG1P01857 330 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 UMPSP11172 480 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 CHN2P52757 468 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 ARFIP2P53365 341 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 UGT2B15P54855 530 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 RPS23P62266 143 aaKnown RBP13.15□□□□□ -0.3
VTI1A-203ENST00000472892 RPL18Q07020 188 aaKnown RBP13.15□□□□□ -0.3
VTI1A-203ENST00000472892 MELKQ14680 651 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 FAM120AOSQ5T036 256 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-203ENST00000472892 NANOGNBQ7Z5D8 188 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 DPPA2Q7Z7J5 298 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 PHC2Q8IXK0 858 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 C10orf82Q8WW14 230 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 LIPHQ8WWY8 451 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 MCHR2Q969V1 340 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 SH3GL3Q99963 347 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 CHODLQ9H9P2 273 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 SAR1AQ9NR31 198 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 SLC7A8Q9UHI5 535 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 RIMS3Q9UJD0 308 aa13.15□□□□□ -0.3
VTI1A-203ENST00000472892 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 M0R233 179 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 MRASO14807 208 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 OR7A10O76100 309 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 FARS2O95363 451 aaKnown RBP13.14□□□□□ -0.31
VTI1A-203ENST00000472892 IFNA14P01570 189 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 F13BP05160 661 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TSPAN19P0C672 248 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TROVE2P10155 538 aaKnown RBP eCLIP13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TNFRSF1BP20333 461 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 PRSS12P56730 875 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TAS2R41P59536 307 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 PIN1Q13526 163 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-203ENST00000472892 REP15Q6BDI9 236 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 OR4K5Q8NGD3 323 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TMEM255BQ8WV15 326 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TMEM239Q8WW34 195 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 SGTBQ96EQ0 304 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 SYT3Q9BQG1 590 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 C20orf141Q9NUB4 165 aa13.14□□□□□ -0.31
VTI1A-203ENST00000472892 STAB1Q9NY15 2570 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 A0A1W2PRG6 482 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 SLC22A23A1A5C7 686 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 MGRN1O60291 552 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 KRT34O76011 436 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 THRBP10828 461 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 ACADSP16219 412 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 SRD5A1P18405 259 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 IL2RGP31785 369 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 LSP1P33241 339 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 KDELR2P33947 212 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 AQP2P41181 271 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 OR1E2P47887 323 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-203ENST00000472892 SEC24CP53992 1094 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 CLRN1P58418 232 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 MAPRE2Q15555 327 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 SLC36A2Q495M3 483 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 ELFN2Q5R3F8 820 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 CGB2Q6NT52 195 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 DEF8Q6ZN54 512 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 SLC30A7Q8NEW0 376 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms