RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 IGHG1P01857 330 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 BMPR1AP36894 532 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 CSNK1A1P48729 337 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 PMPCAQ10713 525 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 MYEOVQ96EZ4 313 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 NUDT22Q9BRQ3 303 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 CHRDQ9H2X0 955 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF768Q9H5H4 540 aaKnown RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 A6NLC8 198 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 SULT2B1O00204 365 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 GPR137BO60478 399 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 OPN1LWP04000 364 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 CHRM4P08173 479 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 CPT2P23786 658 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 EFNA3P52797 238 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 SLC36A2Q495M3 483 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 OR5M10Q6IEU7 315 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 ADAMTSL4Q6UY14 1074 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 ELF4Q99607 663 aaPredicted RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 TAF9BQ9HBM6 251 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 C19orf12Q9NSK7 152 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 CGGBP1Q9UFW8 167 aaPredicted RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 RPH3AQ9Y2J0 694 aaPredicted RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 TSFMP43897 325 aaKnown RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 NPY4RP50391 375 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 Q96M85 177 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 TM7SF3Q9NS93 570 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 PURGQ9UJV8 347 aaKnown RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 TTLL8A6PVC2 850 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 SNRPGP15A8MWD9 76 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 MSTNO14793 375 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 IGLV3-27P01718 113 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 UBE2IP63279 158 aaKnown RBP14.66□□□□□ -0.06
COL17A1-202ENST00000369733 LIPNQ5VXI9 398 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 ACOT7LQ6ZUV0 252 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 SLC35A4Q96G79 324 aa14.66□□□□□ -0.06
COL17A1-202ENST00000369733 KIR2DS5A0A0G2JLQ3 304 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 A0A0G2JNG1 304 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 EFCAB7A8K855 629 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 NUDT19A8MXV4 375 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 KIR2DS3K7RE56 304 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 SHOXO15266 292 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 TMPRSS11DO60235 418 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 ZDHHC11BP0C7U3 371 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 CRYBB2P43320 205 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 HNRNPKP61978 463 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL17A1-202ENST00000369733 KIR2DS5Q14953 304 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 PRSS42Q7Z5A4 293 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 C1orf198Q9H425 327 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF286AQ9HBT8 521 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 KPTNQ9Y664 436 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 MAT1AQ00266 395 aaKnown RBP14.65□□□□□ -0.06
COL17A1-202ENST00000369733 SLC39A5Q6ZMH5 540 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF595Q8IYB9 648 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 NKAIN3Q8N8D7 197 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 FGGYQ96C11 551 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 C20orf24Q9BUV8 137 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 CSAG2Q9Y5P2 127 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 FITM1A5D6W6 292 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 IMPA2O14732 288 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 MAGEB4O15481 346 aaPredicted RBP14.65□□□□□ -0.06
COL17A1-202ENST00000369733 DBHP09172 617 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 C12orf73Q69YU5 71 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 LYSMD1Q96S90 227 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 C12orf57Q99622 126 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 OCSTAMPQ9BR26 566 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 OR11A1Q9GZK7 315 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 NARFLQ9H6Q4 476 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 NRAPQ86VF7 1730 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 RGS11O94810 467 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 SERPINA7P05543 415 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 FCGR2AP12318 317 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 BLVRBP30043 206 aaPredicted RBP14.65□□□□□ -0.06
COL17A1-202ENST00000369733 EPHA5P54756 1037 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 ADAM5Q6NVV9 412 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 GABRG1Q8N1C3 465 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 PLPP5Q8NEB5 264 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 METTL9Q9H1A3 318 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 FTSJ1Q9UET6 329 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 FBXL4Q9UKA2 621 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 TRAV36DV7A0A075B6V5 113 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 OR5H14A6NHG9 310 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 DSCR3O14972 297 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 SSX1Q16384 188 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 SLC25A35Q3KQZ1 300 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 SSX9Q7RTT3 188 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF100Q8IYN0 542 aa14.65□□□□□ -0.06
COL17A1-202ENST00000369733 TRBV5-4A0A0C4DH59 114 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 IFITM5A6NNB3 132 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 HIST1H1CP16403 213 aaKnown RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 ZP3P21754 424 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 TANGO2Q6ICL3 276 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 TMPPEQ6ZT21 453 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 LINC00346Q8IVM7 164 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 SMIM19Q96E16 107 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 SIPA1L3O60292 1781 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 A0A1W2PR48 441 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 A8MXE2 369 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 FTCDNL1E5RQL4 147 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms