RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 VSX1Q9NZR4 365 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-205ENST00000469129 ZNF346Q9UL40 294 aaKnown RBP8.42□□□□□ -1.06
SMC1A-205ENST00000469129 SF3B6Q9Y3B4 125 aaKnown RBP8.42□□□□□ -1.06
SMC1A-205ENST00000469129 PCNX2A6NKB5 2137 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 NCKAP5O14513 1909 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 PNMA8CA0A1B0GUJ8 204 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 IQCMA0A1B0GVH7 501 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 A0A1W2PNU3 283 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 A0A1W2PQL4 384 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 H3BML4 177 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 J3QLW9 94 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TAF4O00268 1085 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 PLPP2O43688 288 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 GPRIN2O60269 458 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 SELENOFO60613 162 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 CBR3O75828 277 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 LALBAP00709 142 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 PLGP00747 810 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TFP02787 698 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TACSTD2P09758 323 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 ZNF19P17023 458 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 CSRP1P21291 193 aaKnown RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 CFL1P23528 166 aaKnown RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 DPP4P27487 766 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 RBMS1P29558 406 aaKnown RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 PYCR1P32322 319 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TGFBR1P36897 503 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 OPRL1P41146 370 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 CYB561P49447 251 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 GABREP78334 506 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 SLC35A1P78382 337 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 AIMP2Q13155 320 aaKnown RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 MYBPHQ13203 477 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 ATP1A4Q13733 1029 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TBC1D25Q3MII6 688 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 ACER2Q5QJU3 275 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 LINC01590Q5TEZ4 76 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 C1QL3Q5VWW1 255 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TIGD3Q6B0B8 471 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 C16orf87Q6PH81 154 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 PAMR1Q6UXH9 720 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 B3GLCTQ6Y288 498 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 KCTD20Q7Z5Y7 419 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 PXKQ7Z7A4 578 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 MS4A15Q8N5U1 240 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 IL22RA1Q8N6P7 574 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 WDSUB1Q8N9V3 476 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 ASB10Q8WXI3 467 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 THOC3Q96J01 351 aaKnown RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 FER1L6-AS2Q96M78 137 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 KLHL15Q96M94 604 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 INTS14Q96SY0 518 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TMED9Q9BVK6 235 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 NUAK2Q9H093 628 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 SYT4Q9H2B2 425 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 WDR76Q9H967 626 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 MARCH7Q9H992 704 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 GALNT8Q9NY28 637 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 FBXL2Q9UKC9 423 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 TRAPPC4Q9Y296 219 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 B3GNT3Q9Y2A9 372 aa8.41□□□□□ -1.06
SMC1A-205ENST00000469129 RPH3AQ9Y2J0 694 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-205ENST00000469129 LOC101059948A0A1B0GTJ6 334 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 B4DXG7 233 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 H7C1C5 153 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 GABRPO00591 440 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 CDRT1O95170 752 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 PMS2P2O95744 297 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 KRT8P05787 483 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 IMPDH2P12268 514 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 MYL9P24844 172 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SRD5A2P31213 254 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 TGM4P49221 684 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 BMXP51813 675 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 OR2B6P58173 313 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 LCN6P62502 163 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 CSNK2A1P68400 391 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 HSF1Q00613 529 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 POU3F1Q03052 451 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 Q0VFX4 171 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 CDK5R1Q15078 307 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ZNF239Q16600 458 aaKnown RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SOWAHCQ53LP3 525 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ABHD17BQ5VST6 288 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 RAET1LQ5VY80 246 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 C22orf42Q6IC83 251 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ZNF544Q6NX49 715 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 RPL22L1Q6P5R6 122 aaKnown RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ARL9Q6T311 187 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 IGF2-ASQ6U949 168 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SLC35D2Q76EJ3 337 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ZBTB46Q86UZ6 589 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 CDC20BQ86Y33 519 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 MARCH9Q86YJ5 346 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 UEVLDQ8IX04 471 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 PM20D2Q8IYS1 436 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 GHDCQ8N2G8 530 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ZFP41Q8N8Y5 198 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 OR51L1Q8NGJ5 315 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms