RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 ADPRHL1Q8NDY3 354 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 CCDC115Q96NT0 180 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 SLC35A5Q9BS91 424 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 PPCSQ9HAB8 311 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 FBXL3Q9UKT7 428 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 POLR3KQ9Y2Y1 108 aaPredicted RBP12.54□□□□□ -0.4
RTN3-214ENST00000545432 WIPI2Q9Y4P8 454 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 CORINQ9Y5Q5 1042 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 MMP24Q9Y5R2 645 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 AHSA1O95433 338 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
RTN3-214ENST00000545432 GCH1P30793 250 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 COPZ1P61923 177 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 RAB1AP62820 205 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 DPY19L1Q2PZI1 675 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 ZNF584Q8IVC4 421 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 PEX5LQ8IYB4 626 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 POP5Q969H6 163 aaKnown RBP12.53□□□□□ -0.4
RTN3-214ENST00000545432 SLC35B4Q969S0 331 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 KTI12Q96EK9 354 aaPredicted RBP12.53□□□□□ -0.4
RTN3-214ENST00000545432 GPA33Q99795 319 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 MECRQ9BV79 373 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 DPY30Q9C005 99 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
RTN3-214ENST00000545432 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 SLC7A8Q9UHI5 535 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 BTNL2Q9UIR0 455 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 NOX1Q9Y5S8 564 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 ARHGAP32A7KAX9 2087 aa12.53□□□□□ -0.4
RTN3-214ENST00000545432 OR2T1O43869 369 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 SHBGP04278 402 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 PRG2P13727 222 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 CAPZA2P47755 286 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 MVDP53602 400 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 TEKQ02763 1124 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 MVKQ03426 396 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 LIN52Q52LA3 116 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 ZNF836Q6ZNA1 936 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 NET1Q7Z628 596 aaPredicted RBP12.52□□□□□ -0.41
RTN3-214ENST00000545432 VRK2Q86Y07 508 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 C4orf33Q8N1A6 199 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 CLIP4Q8N3C7 705 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 CADM2Q8N3J6 435 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 KIF18AQ8NI77 898 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 SLC41A3Q96GZ6 507 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 C1QTNF5Q9BXJ0 243 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 DUSP13Q9UII6 198 aa12.52□□□□□ -0.41
RTN3-214ENST00000545432 IGHV1-69-2A0A0G2JMI3 117 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 SLC22A23A1A5C7 686 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 DNAJC9-AS1A6NH13 148 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 MS4A18H0YCH9 400 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 AIM2O14862 343 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 SEC14L2O76054 403 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 SERPINA5P05154 406 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 NUDT17P0C025 328 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 CD79AP11912 226 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 CHI3L1P36222 383 aaPredicted RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 GIPRP48546 466 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 ANXA11P50995 505 aaKnown RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 CCL8P80075 99 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 PIGFQ07326 219 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 MFSD13AQ14CX5 517 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 MS4A18Q3C1V0 323 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 SPANXN4Q5MJ08 99 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 C5orf46Q6UWT4 87 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 H1FNTQ75WM6 255 aaPredicted RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 RETREG3Q86VR2 466 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 LRRC34Q8IZ02 419 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 C17orf53Q8N3J3 647 aaPredicted RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 DEFB108BQ8NET1 73 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 OR52P1PQ8NH57 321 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 ZNF48Q96MX3 618 aaPredicted RBP12.51□□□□□ -0.41
RTN3-214ENST00000545432 AKTIPQ9H8T0 292 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 TAAR3PQ9P1P4 343 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 GPR160Q9UJ42 338 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 NUP50Q9UKX7 468 aa12.51□□□□□ -0.41
RTN3-214ENST00000545432 M0R082 166 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 M0R3G1 203 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 CDC14BO60729 498 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 UBL3O95164 117 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 CLPTM1O96005 669 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 NR2F1P10589 423 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 RPS5P46782 204 aaKnown RBP12.5□□□□□ -0.41
RTN3-214ENST00000545432 GALK2Q01415 458 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 C1DQ13901 141 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms