RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 BCO1Q9HAY6 547 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TMEM27Q9HBJ8 222 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 RCC2Q9P258 522 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 IL20RAQ9UHF4 553 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TCFL5Q9UL49 500 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 GPR52Q9Y2T5 361 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TMED3Q9Y3Q3 217 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TMEM184BQ9Y519 407 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 SLC22A7Q9Y694 548 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SCN3AQ9NY46 2000 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TRAV14DV4A0A0A6YYC5 116 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 ABHD14A-ACY1A0A1B0GW23 586 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 C17orf102A2RUQ5 167 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OR6C74A6NCV1 312 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 DUXAA6NLW8 204 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OR2AT4A6NND4 320 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 RIIAD1A6NNX1 92 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 ADAM10O14672 748 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC31A2O15432 143 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TGOLN2O43493 480 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TGM5O43548 720 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OR2T1O43869 369 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 PEX10O60683 326 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 FKTNO75072 461 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC25A12O75746 678 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CLDN7O95471 211 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CD74P04233 296 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CD5P06127 495 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CLTBP09497 229 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 GNSP15586 552 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 HMGA1P17096 107 aaKnown RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 ADCYAP1P18509 176 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC2A5P22732 501 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 LAP3P28838 519 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SDHAP31040 664 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 GPX4P36969 197 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 ADCYAP1R1P41586 468 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 GPR4P46093 362 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 YLPM1P49750 1951 aaKnown RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 RBP2P50120 134 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TAS2R19P59542 299 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TAS2R20P59543 309 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 UBE2MP61081 183 aaKnown RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 POLR2LP62875 67 aaKnown RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 B4GALNT1Q00973 533 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 ZNF85Q03923 595 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 EML5Q05BV3 1969 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TAF10Q12962 218 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CSRP2Q16527 193 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 ISXQ2M1V0 245 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 KLHL26Q53HC5 615 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC35D3Q5M8T2 416 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 MRM1Q6IN84 353 aaKnown RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 TNFAIP8L2Q6P589 184 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 TMEM88Q6PEY1 159 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 NHLRC1Q6VVB1 395 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 B3GLCTQ6Y288 498 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SSX9Q7RTT3 188 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC16A13Q7RTY0 426 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 PRSS45Q7RTY3 260 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 RBM45Q8IUH3 476 aaKnown RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 CBLN2Q8IUK8 224 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TRAPPC5Q8IUR0 188 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CDK20Q8IZL9 346 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 RELL2Q8NC24 303 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 GPR156Q8NFN8 814 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OR10H4Q8NGA5 316 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OR5AK3PQ8NH89 298 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 PHOSPHO1Q8TCT1 267 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SKA2Q8WVK7 121 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 LCN9Q8WX39 176 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 LPPQ93052 612 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 KISS1RQ969F8 398 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 TMEM159Q96B96 161 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OTUB2Q96DC9 234 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC25A38Q96DW6 304 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SMIM8Q96KF7 97 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 HS6ST2Q96MM7 605 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 OR1F2PQ96R84 312 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CD180Q99467 661 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 MAP3K3Q99759 626 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 C2orf88Q9BSF0 95 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC17A9Q9BYT1 436 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TOLLIPQ9H0E2 274 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TLNRD1Q9H1K6 362 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 ABCG8Q9H221 673 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SFXN1Q9H9B4 322 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 BEX1Q9HBH7 125 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SIRT3Q9NTG7 399 aaPredicted RBP6.12□□□□□ -1.43
USP28-207ENST00000538475 PARPBPQ9NWS1 579 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 GDE1Q9NZC3 331 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 SLC45A1Q9Y2W3 748 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 ZNF281Q9Y2X9 895 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 CBY1Q9Y3M2 126 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 TIMM10BQ9Y5J6 103 aa6.12□□□□□ -1.43
USP28-207ENST00000538475 LTBP3Q9NS15 1303 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 A0A0B4J2A0 478 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SLC5A10A0PJK1 596 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms