RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 APH1BQ8WW43 257 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 C22orf15Q8WYQ4 148 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 EXT2Q93063 718 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 TCTN2Q96GX1 697 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 OR14A2Q96R54 314 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PKP4Q99569 1192 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 AP5M1Q9H0R1 490 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 IKZF4Q9H2S9 585 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 FBXL2Q9UKC9 423 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 FBXL21Q9UKT6 434 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PCDHGA9Q9Y5G4 932 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 BORCS7-ASMTA0A0B4J1R7 106 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PQD3 144 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 HEPACAM2A8MVW5 462 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 B4DEV8 164 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 CLDN4O14493 209 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 LDLRAD4O15165 306 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 EEF1E1O43324 174 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 SRSF10O75494 262 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 CFDP00746 253 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 CD8AP01732 235 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GLAP06280 429 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 HOXB5P09067 269 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 HOXA5P20719 270 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GDNFP39905 211 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SNRPEP62304 92 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 IRF8Q02556 426 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 BCL2L1Q07817 233 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PNRC1Q12796 327 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 SMAD1Q15797 465 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 RAB11BQ15907 218 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 RBBP7Q16576 425 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GXYLT1Q4G148 440 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ZNF324BQ6AW86 544 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 TMEM205Q6UW68 189 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PXKQ7Z7A4 578 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 RANBP3LQ86VV4 465 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 FCAMRQ8WWV6 532 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PNPLA2Q96AD5 504 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 MRPS24Q96EL2 167 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 ZFP3Q96NJ6 502 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 KLHL5Q96PQ7 755 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 BARHL1Q9BZE3 327 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 RPH3AQ9Y2J0 694 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 PLEKHM1Q9Y4G2 1056 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GOLGB1Q14789 3259 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 MEX3AA1L020 520 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 C9orf170A2RU37 121 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 FAM74A7A6NL05 159 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 DHRS7CA6NNS2 312 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 BCAT2O15382 392 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 FFAR2O15552 330 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PCDH7O60245 1069 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 KCNK5O95279 499 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GCGP01275 180 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 LIMS3P0CW19 117 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 LIMS4P0CW20 117 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GTF2F2P13984 249 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 COX7A2P14406 83 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 RAB5AP20339 215 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 MSX1P28360 303 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 KCNJ3P48549 501 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 NRLP54845 237 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ACTA2P62736 377 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ACTG2P63267 376 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 NKX6-1P78426 367 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 PTSQ03393 145 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GINS1Q14691 196 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 MSMO1Q15800 293 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 MAPK14Q16539 360 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 FAM74A3Q4VXF1 159 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ARHGAP40Q5TG30 622 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 FRG2Q64ET8 278 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SMARCD3Q6STE5 483 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 THNSL2Q86YJ6 484 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 OR8G5Q8NG78 346 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 OR11H4Q8NGC9 324 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 OR6C4Q8NGE1 309 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 OR5R1Q8NH85 324 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 RAET1EQ8TD07 263 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SLAMF9Q96A28 289 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 LRR1Q96L50 414 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ZFP42Q96MM3 310 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 FRG2BQ96QU4 278 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ZNF2Q9BSG1 426 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 ATXN3LQ9H3M9 355 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 PRDM13Q9H4Q3 707 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SLC32A1Q9H598 525 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 ESRP2Q9H6T0 727 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 NMNAT1Q9HAN9 279 aaPredicted RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 NT5MQ9NPB1 228 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 RAD18Q9NS91 495 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 OR6C2Q9NZP2 312 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 KCNE5Q9UJ90 142 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 CA14Q9ULX7 337 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GTF2A1LQ9UNN4 478 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 HS3ST3A1Q9Y663 406 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 TEP1Q99973 2627 aaKnown RBP2.55□□□□□ -2
NEDD4-204ENST00000503468 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 TRBC2A0A5B9 178 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms