RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 ZNF417Q8TAU3 575 aa10.66□□□□□ -0.7
NPHP4-204ENST00000460696 CCDC107Q8WV48 283 aa10.66□□□□□ -0.7
NPHP4-204ENST00000460696 GCDHQ92947 438 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-204ENST00000460696 MR1Q95460 341 aa10.66□□□□□ -0.7
NPHP4-204ENST00000460696 ATF6BQ99941 703 aa10.66□□□□□ -0.7
NPHP4-204ENST00000460696 CRB3Q9BUF7 120 aa10.66□□□□□ -0.7
NPHP4-204ENST00000460696 PLEKHB1Q9UF11 243 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-204ENST00000460696 PLEKHA6Q9Y2H5 1048 aa10.66□□□□□ -0.7
NPHP4-204ENST00000460696 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 C9J4A7 227 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 OR2T1O43869 369 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 ITGA5P08648 1049 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 SRMP19623 302 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 FGF9P31371 208 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 PRSS3P35030 304 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 EMP2P54851 167 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 PRICKLE4Q2TBC4 344 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 POGLUT1Q8NBL1 392 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 GIMAP1Q8WWP7 306 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 GIMAP5Q96F15 307 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 POMT2Q9UKY4 750 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 RPH3AQ9Y2J0 694 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 NPFFR2Q9Y5X5 522 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 NSA2O95478 260 aaKnown RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 ENDOUP21128 410 aaKnown RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 POU3F1Q03052 451 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 SPOCK1Q08629 439 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 CBFBQ13951 182 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 KCTD9Q7L273 389 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF764Q96H86 408 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 SLC46A1Q96NT5 459 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 GABRG3Q99928 467 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-204ENST00000460696 LIN7BQ9HAP6 207 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 SCP2D1Q9UJQ7 156 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 SLC6A5Q9Y345 797 aa10.65□□□□□ -0.7
NPHP4-204ENST00000460696 PLXNA3P51805 1871 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 C13orf42A0A1B0GVH6 325 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 HRKO00198 91 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 SLC43A1O75387 559 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF432O94892 652 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 GLCEO94923 617 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 TBX6O95947 436 aaPredicted RBP10.65□□□□□ -0.71
NPHP4-204ENST00000460696 BCKDHBP21953 392 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 RBM34P42696 430 aaKnown RBP10.65□□□□□ -0.71
NPHP4-204ENST00000460696 AFF3P51826 1226 aaKnown RBP10.65□□□□□ -0.71
NPHP4-204ENST00000460696 HSD11B2P80365 405 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 FAPQ12884 760 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 MEP1BQ16820 701 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 GPR139Q6DWJ6 353 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 C17orf47Q8NEP4 570 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 FAM46BQ96A09 425 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 CTRCQ99895 268 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 ARL6Q9H0F7 186 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 SLA2Q9H6Q3 261 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 NPAP1Q9NZP6 1156 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 ACAD8Q9UKU7 415 aa10.65□□□□□ -0.71
NPHP4-204ENST00000460696 TRABD2BA6NFA1 517 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ACOT7O00154 380 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 SEMA7AO75326 666 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 NKX2-2O95096 273 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 FCARP24071 287 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 DDOSTP39656 456 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 MPLP40238 635 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 MAGEB1P43366 347 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 FXYD6P3P58550 94 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 LTBQ06643 244 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 TMPRSS11FQ6ZWK6 438 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 THRSPQ92748 146 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 PPP1R14AQ96A00 147 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 SLC25A44Q96H78 314 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-204ENST00000460696 DERL3Q96Q80 235 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 OR1F2PQ96R84 312 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 LRRC61Q9BV99 259 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ENKD1Q9H0I2 346 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 S1PR5Q9H228 398 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 SUSD5O60279 629 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 TFP02787 698 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 AMY2AP04746 511 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 DIO1P49895 249 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 CDK10Q15131 360 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 AKIRIN2Q53H80 203 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 MED18Q9BUE0 208 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 POTEKPQ9BYX7 375 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 NOX3Q9HBY0 568 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 C2orf42Q9NWW7 574 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 C19orf25Q9UFG5 118 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-204ENST00000460696 MAB21L2Q9Y586 359 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 POLEQ07864 2286 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 A0A0B4J2E0 115 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 A0A1B0GX12 115 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 KDM4BO94953 1096 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 CBX7O95931 251 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 LIPCP11150 499 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 CD27P26842 260 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 UQCRC1P31930 480 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 Q499Y3 187 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms