RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CNTN4Q8IWV2 1026 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 TMEM123Q8N131 208 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 OR4F15Q8NGB8 312 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 NUDT9Q9BW91 350 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 TAS2R5Q9NYW4 299 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 COQ4Q9Y3A0 265 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 ABCA6Q8N139 1617 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 ACOD1A6NK06 481 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 DDAH2O95865 285 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 DNAJB1P25685 340 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 RPS16P62249 146 aaKnown RBP11.48□□□□□ -0.57
SMU1-201ENST00000397149 ELAVL3Q14576 367 aaKnown RBP11.48□□□□□ -0.57
SMU1-201ENST00000397149 Q6ZTK2 550 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 VRK2Q86Y07 508 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 OR5M1Q8NGP8 315 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 UTP4Q969X6 686 aaKnown RBP11.48□□□□□ -0.57
SMU1-201ENST00000397149 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 ADAMTS10Q9H324 1103 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 ZNF724A8MTY0 619 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 SLC16A6O15403 523 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 YKT6O15498 198 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 SIGLEC6O43699 453 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 ZFAND5O76080 213 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 OR8G3PP0DMU2 310 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 GPR176Q14439 515 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 CPZQ66K79 652 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 MISPQ8IVT2 679 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 ANGPTL6Q8NI99 470 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 YIPF5Q969M3 257 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 TRAPPC4Q9Y296 219 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 MRPS28Q9Y2Q9 187 aaKnown RBP11.48□□□□□ -0.57
SMU1-201ENST00000397149 C5AR1P21730 350 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 RTL6Q6ICC9 239 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 OR2G3Q8NGZ4 309 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 NIT2Q9NQR4 276 aa11.48□□□□□ -0.57
SMU1-201ENST00000397149 DNMT3BQ9UBC3 853 aaKnown RBP11.48□□□□□ -0.57
SMU1-201ENST00000397149 P2RY10O00398 339 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 P2RX6O15547 441 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 NME2P1O60361 137 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 OR4D1Q15615 310 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 CD300LGQ6UXG3 332 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 GGHQ92820 318 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 MUL1Q969V5 352 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 SPACA1Q9HBV2 294 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 C5orf52A6NGY3 159 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 TCN2P20062 427 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 CNR1P21554 472 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 KIR2DL3P43628 341 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 TIPARPQ7Z3E1 657 aaKnown RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 OR1J2Q8NGS2 313 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 TECTBQ96PL2 329 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 PPP5D1E7EU14 171 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 SCGB1A1P11684 91 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 DLX5P56178 289 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 NTHL1P78549 312 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 GTDC1Q4AE62 458 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 THEM4Q5T1C6 240 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 DCAF12Q5T6F0 453 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 B3GNT7Q8NFL0 401 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 TMEM265A0A087WTH1 108 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 ICMTO60725 284 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 PRAF2O60831 178 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 UPK1BO75841 260 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 CD40P25942 277 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 CASP7P55210 303 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 PCBP3P57721 371 aaKnown RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMU1-201ENST00000397149 IGSF8Q969P0 613 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 CYR61O00622 381 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 OR2C1O95371 312 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 MTMR14Q8NCE2 650 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 TEX264Q9Y6I9 313 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 A0A0U1RQF3 1178 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 LOC285095A0A1B0GVY8 99 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 MT-ND4LP03901 98 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 SNRPBP14678 240 aaKnown RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 FABP9Q0Z7S8 132 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 ZDHHC24Q6UX98 284 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 IGDCC3Q8IVU1 814 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 GLIS1Q8NBF1 620 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 SEMA6DQ8NFY4 1073 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 GOT1L1Q8NHS2 421 aaPredicted RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
SMU1-201ENST00000397149 RANGRFQ9HD47 186 aaPredicted RBP11.47□□□□□ -0.57
SMU1-201ENST00000397149 MEIOCA2RUB1 952 aa11.46□□□□□ -0.57
SMU1-201ENST00000397149 G3V3Q6 166 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms