RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CD207Q9UJ71 328 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 EMCNQ9ULC0 261 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 RNF150Q9ULK6 438 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ICAM5Q9UMF0 924 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 HEMK1Q9Y5R4 338 aaPredicted RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CDY1Q9Y6F8 540 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 WNT6Q9Y6F9 365 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 HSPE1-MOB4S4R3N1 261 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CARMIL3Q8ND23 1372 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 JCADQ9P266 1359 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM2Q9UHN6 1383 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 PARP4Q9UKK3 1724 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PPIAL4EA0A075B759 164 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 A0A087WWL8 130 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 NPIPA5A0A0B4J1W7 369 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TRBV11-1A0A0K0K1C0 115 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM89A2RUT3 159 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PRAMEF22A3QJZ6 481 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PRSS37A4D1T9 235 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 A8MU76 341 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ANHXE9PGG2 379 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 NPIPA5E9PKD4 350 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 NPIPA3F8WFD2 350 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RAB27BO00194 218 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SULT1C2O00338 296 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PPP6CO00743 305 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 MSI1O43347 362 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 HOXA3O43365 443 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CHST10O43529 356 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SYNGR3O43761 229 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 FCGR3BO75015 233 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CBX6O95503 412 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 GOT2P00505 430 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 DCNP07585 359 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RAB40ALP0C0E4 278 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PPIAL4FP0DN26 164 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 FCGR1AP12314 374 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 GABRA1P14867 456 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CPN1P15169 458 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ARSAP15289 507 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 B4GALT1P15291 398 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF23P17027 643 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 HOXD9P28356 352 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 S100A11P31949 105 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PRDX2P32119 198 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PMELP40967 661 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PTGFRP43088 359 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 GNPDA1P46926 289 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SOX2P48431 317 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 LIMK2P53671 638 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 WNT3AP56704 352 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CLDN18P56856 261 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 KLF3P57682 345 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RANP62826 216 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RAP1AP62834 184 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 LCN2P80188 198 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 EGR4Q05215 589 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SLC34A1Q06495 639 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CNTN1Q12860 1018 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 UBXN2BQ14CS0 331 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SF3A2Q15428 464 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ATP6V1FQ16864 119 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 KIF19Q2TAC6 998 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM176BQ3YBM2 270 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CDNFQ49AH0 187 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 HSD17B12Q53GQ0 312 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CXorf66Q5JRM2 361 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 DCAF10Q5QP82 559 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RBM48Q5RL73 367 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SUSD4Q5VX71 490 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SLC22A10Q63ZE4 541 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PMS2CLQ68D20 193 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PLAG1Q6DJT9 500 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 OR4F3Q6IEY1 312 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TYW3Q6IPR3 259 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 NANOGP8Q6NSW7 305 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ACSM6Q6P461 480 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 NIPAL3Q6P499 406 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 XKRXQ6PP77 449 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 KYAT3Q6YP21 454 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 MBOAT1Q6ZNC8 495 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM179Q6ZVK1 233 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TCF24Q7RTU0 167 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 MRPL52Q86TS9 123 aaKnown RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ADIPOR2Q86V24 386 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 KCNMB4Q86W47 210 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 SERPINA9Q86WD7 417 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 COMMD2Q86X83 199 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 RIMKLAQ8IXN7 391 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ADGRF3Q8IZF5 1079 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 LGI3Q8N145 548 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM251Q8N6I4 163 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 CSNK1A1LQ8N752 337 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 EMC1Q8N766 993 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF283Q8N7M2 679 aa4.09□□□□□ -1.75
NIPBL-206ENST00000509429 PTGR2Q8N8N7 351 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 Q8N9G6 341 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-206ENST00000509429 LRRC75AQ8NAA5 344 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms