RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 DEGS2Q6QHC5 323 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 SASS6Q6UVJ0 657 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 METTL7BQ6UX53 244 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 HPS6Q86YV9 775 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR7G2Q8NG99 324 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR4F6Q8NGB9 312 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR2A12Q8NGT7 310 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 DNAJA4Q8WW22 397 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 STARD8Q92502 1023 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 KIFAP3Q92845 792 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 MS4A14Q96JA4 679 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 IFT74Q96LB3 600 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 ZNF641Q96N77 438 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 PANX1Q96RD7 426 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 C11orf70Q9BRQ4 267 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 BBS2Q9BXC9 721 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 SRXN1Q9BYN0 137 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 FRMD8P1Q9BZ68 369 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 MRPL37Q9BZE1 423 aaKnown RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 TRIM15Q9C019 465 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 ILKAPQ9H0C8 392 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 PPA2Q9H2U2 334 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 MRM3Q9HC36 420 aaKnown RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 IL37Q9NZH6 218 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 PSMC3IPQ9P2W1 217 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 DPM3Q9P2X0 92 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 KLK13Q9UKR3 277 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 STK38LQ9Y2H1 464 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 ATP6V1DQ9Y5K8 247 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 COMMD3-BMI1R4GMX3 469 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 SBNO1A3KN83 1393 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 SCRIBQ14160 1630 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 IGHV3-35A0A0C4DH35 117 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 LOC100653049A0A140TA62 436 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 LRRIQ3A6PVS8 624 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 E9PQ18 207 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 GOLGA6L19H0YKK7 550 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 NDUFS8O00217 210 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 PI15O43692 258 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 KRT34O76011 436 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 DUSP14O95147 198 aaKnown RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 HLA-DRAP01903 254 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 P04436 131 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 STSP08842 583 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 ZNF43P17038 809 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 FDFT1P37268 417 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 VHLP40337 213 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 CBX5P45973 191 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 POLR2GP62487 172 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 XRCC4Q13426 336 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 IL18Q14116 193 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 NCF4Q15080 339 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 ALKBH6Q3KRA9 238 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR5M10Q6IEU7 315 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 SLC25A48Q6ZT89 311 aaKnown RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 SLC25A42Q86VD7 318 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 GPR65Q8IYL9 337 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 OFCC1Q8IZS5 231 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 UFD1Q92890 307 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 ANKRD9Q96BM1 317 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 HAVCR1Q96D42 359 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 PLEKHA8Q96JA3 519 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 NOL4LQ96MY1 436 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 VGLL1Q99990 258 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 PYGO2Q9BRQ0 406 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 CENPKQ9BS16 269 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 RNF126Q9BV68 326 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 UPF3BQ9BZI7 483 aaKnown RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 AUNIPQ9H7T9 357 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 GEMIN7Q9H840 131 aaKnown RBP3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 ZNF160Q9HCG1 818 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 MIEF1Q9NQG6 463 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR1A1Q9P1Q5 309 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 COPS3Q9UNS2 423 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 STARD10Q9Y365 291 aa3.75□□□□□ -1.81
HMGB1P13-201ENST00000406019 CCDC180Q9P1Z9 1646 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 IGKV3D-20A0A0C4DH25 116 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 TRBV11-1A0A0K0K1C0 115 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 IQANK1A0A1B0GTG1 560 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 GOLGA6L4A6NEF3 574 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 A8MXQ7 604 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 HSBP1L1C9JCN9 74 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 DCTN6O00399 190 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 DNAJB6O75190 326 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 CBR3O75828 277 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 C1orf105O95561 183 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 FTH1P02794 183 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 MMP1P03956 469 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SLC35E2P0CK97 266 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR8G3PP0DMU2 310 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 FOLR2P14207 255 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 IGLL1P15814 213 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 TNNI1P19237 187 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 CALCRP30988 508 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 EPHX2P34913 555 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 CCT6AP40227 531 aaKnown RBP3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 MAGEA9P43362 315 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 RPL34P49207 117 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms