RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MMP27Q9H306 513 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 NPAP1Q9NZP6 1156 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 AKAP7Q9P0M2 348 aaPredicted RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 CNTRLQ7Z7A1 2325 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 SMIM30A4D0T7 59 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 A6NL46 340 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 DVL2O14641 736 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 DKK1O94907 266 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 ASAH2BP0C7U1 165 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 TGM4P49221 684 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 CLK1P49759 484 aaKnown RBP13.55□□□□□ -0.24
MKS1-202ENST00000393119 RPS4XP62701 263 aaKnown RBP13.55□□□□□ -0.24
MKS1-202ENST00000393119 CDCP2Q5VXM1 449 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 SSX6Q7RTT6 188 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 FCGR1BQ92637 280 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 FOXN4Q96NZ1 517 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 OR2B2Q9GZK3 357 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 ZNF700Q9H0M5 742 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 METTL7AQ9H8H3 244 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 EVA1AQ9H8M9 152 aa13.55□□□□□ -0.24
MKS1-202ENST00000393119 FGF20Q9NP95 211 aaPredicted RBP13.55□□□□□ -0.24
MKS1-202ENST00000393119 SPIN1Q9Y657 262 aaPredicted RBP13.55□□□□□ -0.24
MKS1-202ENST00000393119 RIIAD1A6NNX1 92 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 C12orf71A8MTZ7 269 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 DCTN6O00399 190 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 HK1P19367 917 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 SLC2A5P22732 501 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 LIMK1P53667 647 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 CTXN1P60606 82 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.54□□□□□ -0.24
MKS1-202ENST00000393119 IL10RAQ13651 578 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 TRIP6Q15654 476 aaKnown RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 KLHL22Q53GT1 634 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 FAM209AQ5JX71 171 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 LRRC75AQ8NAA5 344 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 NPEPL1Q8NDH3 523 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 SPRYD4Q8WW59 207 aaPredicted RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 TMCO6Q96DC7 493 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 TAAR9Q96RI9 348 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 TM9SF2Q99805 663 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 MND1Q9BWT6 205 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 TEX12Q9BXU0 123 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 PRRG3Q9BZD7 231 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 ABCB10Q9NRK6 738 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 MED17Q9NVC6 651 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 MRPS18AQ9NVS2 196 aaKnown RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 TNFRSF10DQ9UBN6 386 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 NXT1Q9UKK6 140 aaKnown RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 RIF1Q5UIP0 2472 aaKnown RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 NSG1A0A0A6YYJ2 146 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 H3BML4 177 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 BGLAPP02818 100 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 SCG5P05408 212 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 PRKCAP17252 672 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 GRPRP30550 384 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 PYCR1P32322 319 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 NAA10P41227 235 aaPredicted RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 SLC6A8P48029 635 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 FOXF1Q12946 379 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 MDGA2Q7Z553 956 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 PRSS33Q8NF86 280 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 OR10H4Q8NGA5 316 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 C9orf43Q8TAL5 461 aaPredicted RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 TMEM43Q9BTV4 400 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 EXOSC4Q9NPD3 245 aaKnown RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 NRIP3Q9NQ35 241 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 ERVK13-1Q9NX77 482 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 TAS2R5Q9NYW4 299 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 NCDNQ9UBB6 729 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 SIRT4Q9Y6E7 314 aaPredicted RBP13.54□□□□□ -0.24
MKS1-202ENST00000393119 EML6Q6ZMW3 1958 aa13.54□□□□□ -0.24
MKS1-202ENST00000393119 J3QRE1 110 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 DLGAP3O95886 979 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 CCL3P10147 92 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 HLA-DOBP13765 273 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 MYL12AP19105 171 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 AHCYP23526 432 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 TUBA1BP68363 451 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 EFR3AQ14156 821 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 CARTPTQ16568 116 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 ZNF404Q494X3 552 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 SLC6A19Q695T7 634 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 TUBA1AQ71U36 451 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 POC5Q8NA72 575 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 NLGN4YQ8NFZ3 816 aaPredicted RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 SPACA9Q96E40 222 aaPredicted RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 DCSTAMPQ9H295 470 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 MARCH7Q9H992 704 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 EXOGQ9Y2C4 368 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms