RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 URM1Q9BTM9 101 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RTN4RQ9BZR6 473 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CHST11Q9NPF2 352 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RBFOX1Q9NWB1 397 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCNMB2Q9Y691 235 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TTC24A2A3L6 582 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SIRPB1O00241 398 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GAPDHSO14556 408 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TP53P04637 393 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RAB40ALP0C0E4 278 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CD44P16070 742 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 NTSR1P30989 418 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPS15P62841 145 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 B4GALNT1Q00973 533 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 KRTCAP3Q53RY4 240 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 HBMQ6B0K9 141 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ANKRD16Q6P6B7 361 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM251Q8N6I4 163 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR11L1Q8NGX0 322 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RAB40AQ8WXH6 277 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CHADO15335 359 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 HBP1O60381 514 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 HIST1H1BP16401 226 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADCYAP1R1P41586 468 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SPP2Q13103 211 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 S100A7L2Q5SY68 101 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 C18orf63Q68DL7 685 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPSM1Q86YR5 675 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4S1Q8NGB4 309 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ST8SIA2Q92186 375 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TFAP2CQ92754 450 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 KIRREL1Q96J84 757 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 MAP6Q96JE9 813 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF317Q96PQ6 595 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 PTPN18Q99952 460 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 DEFB129Q9H1M3 183 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 LRTM1Q9HBL6 345 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 AKAP12Q02952 1782 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SALL3Q9BXA9 1300 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 HACD1B0YJ81 288 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 PROSCO94903 275 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GIFP27352 417 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GJA5P36382 358 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RAC1P63000 192 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CXCL9Q07325 125 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF621Q6ZSS3 439 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC51AQ86UW1 340 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 YIPF7Q8N8F6 280 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC2A12Q8TD20 617 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TAPBPLQ9BX59 468 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SEC61A2Q9H9S3 476 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC7A7Q9UM01 511 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SYNGR4O95473 234 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TSPAN12O95859 305 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SOD3P08294 240 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CXCR4P61073 352 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CLEC18BQ6UXF7 455 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 LRRC3Q9BY71 257 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TBL1XR1Q9BZK7 514 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 P2RY12Q9H244 342 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ELOVL3Q9HB03 270 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR6C3Q9NZP0 311 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 FANCMQ8IYD8 2048 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 QRICH2Q9H0J4 1663 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SIX3O95343 332 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SP9P0CG40 484 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CCR2P41597 374 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SPIN4Q56A73 249 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR8I2Q8N0Y5 310 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 PROKR2Q8NFJ6 384 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4F6Q8NGB9 312 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4C16Q8NGL9 310 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 DCAF4Q8WV16 495 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 RTN4IP1Q8WWV3 396 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 LINC01599Q8WXQ3 324 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC45A3Q96JT2 553 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 GORASP2Q9H8Y8 452 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 IL17BQ9UHF5 180 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 EMC8O43402 210 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 F11P03951 625 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CXCR1P25024 350 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC47A2Q86VL8 602 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC15A3Q8IY34 581 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 C7orf43Q8WVR3 580 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPUSD4Q96CM3 377 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CADM1Q9BY67 442 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SYNPO2LQ9H987 977 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 KLRF2D3W0D1 207 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 NTSR2O95665 410 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 HOXD13P35453 343 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OC90Q02509 493 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCNC4Q03721 635 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SCARF1Q14162 830 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 MSMO1Q15800 293 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC22A6Q4U2R8 563 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 AADACL3Q5VUY0 350 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 C3orf67Q6ZVT6 689 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF627Q7L945 461 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 TAS1R3Q7RTX0 852 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms