RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 SLC18A1P54219 525 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 C6orf10Q5SRN2 563 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 CYB5R2Q6BCY4 276 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 MSANTD1Q6ZTZ1 278 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 ZIC4Q8N9L1 334 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 SLC38A5Q8WUX1 472 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 PROX1Q92786 737 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 ZNF385AQ96PM9 386 aaKnown RBP13.72□□□□□ -0.21
VAT1-205ENST00000587173 KCNS3Q9BQ31 491 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 OBP2BQ9NPH6 170 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 TMEM160Q9NX00 188 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 MOKQ9UQ07 419 aa13.72□□□□□ -0.21
VAT1-205ENST00000587173 ZNF443Q9Y2A4 671 aaPredicted RBP13.72□□□□□ -0.21
VAT1-205ENST00000587173 UBDO15205 165 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 USF1P22415 310 aaPredicted RBP13.71□□□□□ -0.21
VAT1-205ENST00000587173 POLR2JP52435 117 aaKnown RBP13.71□□□□□ -0.21
VAT1-205ENST00000587173 BNIP2Q12982 314 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 MAPK11Q15759 364 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 HIKESHIQ53FT3 197 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 RNF220Q5VTB9 566 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 C1orf140Q5VVS0 124 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 FBXO17Q96EF6 278 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 MAELQ96JY0 434 aaKnown RBP13.71□□□□□ -0.21
VAT1-205ENST00000587173 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 BEX2Q9BXY8 128 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 RAD21L1Q9H4I0 556 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 SDR39U1Q9NRG7 319 aaPredicted RBP13.71□□□□□ -0.21
VAT1-205ENST00000587173 LPAR3Q9UBY5 353 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 RASD1Q9Y272 281 aa13.71□□□□□ -0.21
VAT1-205ENST00000587173 DSPPQ9NZW4 1301 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 ZNF587BE7ETH6 402 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 KLF11O14901 512 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 AHSA1O95433 338 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 F12P00748 615 aaPredicted RBP13.7□□□□□ -0.22
VAT1-205ENST00000587173 GTF2E2P29084 291 aaKnown RBP13.7□□□□□ -0.22
VAT1-205ENST00000587173 PDLIM4P50479 330 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 MVDP53602 400 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 UBE2NP61088 152 aaKnown RBP13.7□□□□□ -0.22
VAT1-205ENST00000587173 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.22
VAT1-205ENST00000587173 MST1LQ2TV78 715 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 SLC9B1Q4ZJI4 515 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 ZNF311Q5JNZ3 666 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 PRAMEF8Q5VWM4 474 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 PRAMEF7Q5VXH5 474 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 CREB3L2Q70SY1 520 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 MIER2Q8N344 545 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 STK35Q8TDR2 534 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 TMEM19Q96HH6 336 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 SHARPINQ9H0F6 387 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 SLC6A13Q9NSD5 602 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 FKBP7Q9Y680 259 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 ALPK2Q86TB3 2170 aa13.7□□□□□ -0.22
VAT1-205ENST00000587173 IGHV1-18A0A0C4DH31 117 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 C5orf58C9J3I9 102 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 LMX1BO60663 402 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 CRYAAP02489 173 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 PRG2P13727 222 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 MAGOHP61326 146 aaKnown RBP13.69□□□□□ -0.22
VAT1-205ENST00000587173 SNRPD2P62316 118 aaKnown RBP13.69□□□□□ -0.22
VAT1-205ENST00000587173 GGTLC2Q14390 218 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 TBRG1Q3YBR2 411 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 RPS26P11Q5JNZ5 115 aaPredicted RBP13.69□□□□□ -0.22
VAT1-205ENST00000587173 MFSD8Q8NHS3 518 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 SLC35B4Q969S0 331 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 SLC25A36Q96CQ1 311 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 BOD1Q96IK1 185 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 SORCS2Q96PQ0 1159 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
VAT1-205ENST00000587173 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 TMBIM4Q9HC24 238 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 MOV10Q9HCE1 1003 aaKnown RBP13.69□□□□□ -0.22
VAT1-205ENST00000587173 RPS6KB2Q9UBS0 482 aa13.69□□□□□ -0.22
VAT1-205ENST00000587173 STAB1Q9NY15 2570 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 VSTM5A8MXK1 200 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 VWC2LB2RUY7 222 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 CLIC1O00299 241 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 FRS3O43559 492 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 LGI1O95970 557 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 GZMKP49863 264 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 SELENOPP49908 381 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 P2RY4P51582 365 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 STX1BP61266 288 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 LGALS3BPQ08380 585 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 GTDC1Q4AE62 458 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 AGBL2Q5U5Z8 902 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 NIPAL3Q6P499 406 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 SERPINA11Q86U17 422 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 ARIH2OSQ8N7S6 290 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 OR1K1Q8NGR3 316 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 BBS10Q8TAM1 723 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 VPS33AQ96AX1 596 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 C3orf49Q96BT1 292 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 ALKBH3Q96Q83 286 aaPredicted RBP13.68□□□□□ -0.22
VAT1-205ENST00000587173 OR52B2Q96RD2 323 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 PIMREGQ9BSJ6 248 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 BCL2L10Q9HD36 194 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 PLCE1Q9P212 2302 aa13.68□□□□□ -0.22
VAT1-205ENST00000587173 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms