RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TPM1P09493 284 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 WNT2P09544 360 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 VSIG10L2P0DP72 767 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 UROSP10746 265 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF250P15622 560 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF14P17017 642 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 MPIP34949 423 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 KLF3P57682 345 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 GNB2P62879 340 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF460Q14592 562 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 QPRTQ15274 297 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 CPSF6Q16630 551 aaKnown RBP eCLIP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 TSTQ16762 297 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 STEAP4Q687X5 459 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 RGS7BPQ6MZT1 257 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 LINGO2Q7L985 606 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 COMMD6Q7Z4G1 85 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ZAR1Q86SH2 424 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 MYLK4Q86YV6 388 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 DDIASQ8IXT1 998 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 AGGF1Q8N302 714 aaeCLIP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 MUC20Q8N307 709 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 FITM2Q8N6M3 262 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 DTX3Q8N9I9 347 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ZIC4Q8N9L1 334 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 CPEB3Q8NE35 698 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 PHOSPHO1Q8TCT1 267 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 WIPF2Q8TF74 440 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ISOC1Q96CN7 298 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF75AQ96N20 296 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ALKBH3Q96Q83 286 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 TSPAN32Q96QS1 320 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 NUDT16L1Q9BRJ7 211 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 MRPL1Q9BYD6 325 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 PCDHAC1Q9H158 963 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 RANBP3Q9H6Z4 567 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 NHEJ1Q9H9Q4 299 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 NANOGQ9H9S0 305 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 SLC35C2Q9NQQ7 365 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 GIMAP4Q9NUV9 329 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 CD274Q9NZQ7 290 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 KIF17Q9P2E2 1029 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 OPTCQ9UBM4 332 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 SLC7A8Q9UHI5 535 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 TRAPPC4Q9Y296 219 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 CARD8Q9Y2G2 431 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 ACOT9Q9Y305 439 aa5.46□□□□□ -1.54
HERPUD1-217ENST00000569429 DNAH6Q9C0G6 4158 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 A0A096LPK6 155 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 IGHV1-69DA0A0B4J2H0 117 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 SERTM1A2A2V5 107 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 H0YHG0 523 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 RPL36A-HNRNPH2H7BZ11 118 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 EIF1BO60739 113 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 DNAJA2O60884 412 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 RAMP3O60896 148 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 SKAP2O75563 359 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 KCNK2O95069 426 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 IGHV1-69P01742 117 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 THRBP10828 461 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 FAHP16930 419 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 FKBP2P26885 142 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 EPHA3P29320 983 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 MAGEA3P43357 314 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 CLK1P49759 484 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 VEGFCP49767 419 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 DGCR2P98153 550 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 MOGQ16653 247 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 PRAMEF8Q5VWM4 474 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 PRAMEF7Q5VXH5 474 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 MMGT1Q8N4V1 131 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 L3MBTL4Q8NA19 623 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 ANKK1Q8NFD2 765 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 OR5W2Q8NH69 310 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 OR5R1Q8NH85 324 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 PPP1R35Q8TAP8 253 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 SYNPRQ8TBG9 265 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 GPR151Q8TDV0 419 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 UBTD2Q8WUN7 234 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 IPCEF1Q8WWN9 437 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 ST8SIA1Q92185 356 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 EXOSC8Q96B26 276 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 DNAJA3Q96EY1 480 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 C3orf30Q96M34 536 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF385AQ96PM9 386 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 DCLRE1CQ96SD1 692 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 NAA11Q9BSU3 229 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 SF3B5Q9BWJ5 86 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 LINC00470Q9BZP3 86 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 SHCBP1LQ9BZQ2 653 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 EGLN1Q9GZT9 426 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 QRSL1Q9H0R6 528 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 PPA2Q9H2U2 334 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 XAB2Q9HCS7 855 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 INPP5EQ9NRR6 644 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 DDX18Q9NVP1 670 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 DCAF16Q9NXF7 216 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 B3GNT2Q9NY97 397 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNRD1Q9P1U0 126 aa5.45□□□□□ -1.54
HERPUD1-217ENST00000569429 VPS13DQ5THJ4 4388 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms