RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CD164L2Q6UWJ8 174 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM64Q6YI46 380 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 C1orf186Q6ZWK4 172 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM131BQ86XD5 332 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 RTL3Q8N8U3 475 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 RELL2Q8NC24 303 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 OR52B6Q8NGF0 335 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 MIPOL1Q8TD10 442 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM46BQ96A09 425 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 C5orf30Q96GV9 206 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 GAL3ST4Q96RP7 486 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 SPXQ9BT56 116 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 RAB33BQ9H082 229 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 TSPYL1Q9H0U9 437 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 THAP9Q9H5L6 903 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF665Q9H7R5 613 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF160Q9HCG1 818 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 SYTL2Q9HCH5 934 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 IL1RAPQ9NPH3 570 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 DDX19AQ9NUU7 478 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 SOHLH2Q9NX45 425 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF319Q9P2F9 582 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 IL19Q9UHD0 177 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 UBQLN2Q9UHD9 624 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 TEKT2Q9UIF3 430 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ERVK-19Q9WJR5 959 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 PCNX3Q9H6A9 2034 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A096LNT2 108 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 C5orf51A6NDU8 294 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ANKRD63C9JTQ0 380 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 E7EQ34 232 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CCSO14618 274 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CHUKO15111 745 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SEC22BO75396 215 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 EPOP01588 193 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 APOEP02649 317 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 PRB2P02812 416 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 GSTA2P09210 222 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SBK2P0C263 348 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ANPEPP15144 967 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 GAP43P17677 238 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 AZU1P20160 251 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 PKLRP30613 574 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CD86P42081 329 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 TKTL1P51854 596 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CRYBA2P53672 197 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 MTTPP55157 894 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC8A3P57103 927 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 LMO4P61968 165 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 RPS4XP62701 263 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 UBE2IP63279 158 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 DCDP81605 110 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF33BQ06732 778 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 MFGE8Q08431 387 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 TSTA3Q13630 321 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 PDE7AQ13946 482 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 LASP1Q14847 261 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF146Q15072 292 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 MS4A18Q3C1V0 323 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 TOR1AIP1Q5JTV8 583 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 RIPPLY2Q5TAB7 128 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 UNC5DQ6UXZ4 953 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CERS6Q6ZMG9 384 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 DNM1P46Q6ZS02 220 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 TMEM26Q6ZUK4 368 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 GPRIN3Q6ZVF9 776 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 OR4N5Q8IXE1 308 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SPAG16Q8N0X2 631 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 C12orf29Q8N999 325 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 TRPV3Q8NET8 790 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 OR11G2Q8NGC1 345 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 OR5B17Q8NGF7 314 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 RNASE8Q8TDE3 154 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 GPR148Q8TDV2 347 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 PSMF1Q92530 271 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SYAP1Q96A49 352 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF274Q96GC6 653 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SPATA13Q96N96 652 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ERGIC2Q96RQ1 377 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CCT8L2Q96SF2 557 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SSX3Q99909 188 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 PINK1Q9BXM7 581 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ANGPTL4Q9BY76 406 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SLITRK2Q9H156 845 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SMYD3Q9H7B4 428 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 POPDC2Q9HBU9 364 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 GPN1Q9HCN4 374 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 S100A14Q9HCY8 104 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 ABCC13Q9NSE7 274 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 DNAJC11Q9NVH1 559 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 PLEK2Q9NYT0 353 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 CTSZQ9UBR2 303 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 BLOC1S6Q9UL45 172 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 KCNK6Q9Y257 313 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 FOXA2Q9Y261 457 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC17A4Q9Y2C5 497 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 MOB4Q9Y3A3 225 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 OR51B4Q9Y5P0 310 aa2.83□□□□□ -1.96
TOPBP1-208ENST00000511439 SACSQ9NZJ4 4579 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms