RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 KTI12Q96EK9 354 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 ALKBH3Q96Q83 286 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 PTDSS2Q9BVG9 487 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 PRR14Q9BWN1 585 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 AMBRA1Q9C0C7 1298 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC17A5Q9NRA2 495 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 SEC14L4Q9UDX3 406 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 A0A1B0GWA3 101 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 EDF1O60869 148 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 PNMTP11086 282 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 GPX2P18283 190 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 CBLP22681 906 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 PTAFRP25105 342 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 CD40P25942 277 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 MPGP29372 298 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 SELENOPP49908 381 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 RGS8P57771 180 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 TGFBR3Q03167 851 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 ALG10BQ5I7T1 473 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 KLHL24Q6TFL4 600 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 DLEU7Q6UYE1 221 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 CREB3L2Q70SY1 520 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 KDM8Q8N371 416 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 C17orf78Q8N4C9 275 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 POMGNT2Q8NAT1 580 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 C1orf162Q8NEQ5 155 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 MFSD8Q8NHS3 518 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 ZNF607Q96SK3 696 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 TRAF4Q9BUZ4 470 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 ZNF385DQ9H6B1 395 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 TMEM38AQ9H6F2 299 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 FAIMQ9NVQ4 179 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 TMEM45AQ9NWC5 275 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC13A4Q9UKG4 626 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 TRIM33Q9UPN9 1127 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 MGAT4BQ9UQ53 548 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 ANGPT4Q9Y264 503 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 RASD1Q9Y272 281 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 AMDHD2Q9Y303 409 aa16.91■□□□□ 0.3
CCHCR1-210ENST00000464012 A0A0G2JND7 137 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 FTCDNL1E5RQL4 147 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 ANGPT2O15123 496 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 SASH3O75995 380 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 VAMP5O95183 116 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 MTPNP58546 118 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 IL1RL1Q01638 556 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 TNK1Q13470 666 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 SELPLGQ14242 412 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 CYP51A1Q16850 503 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 RUNDC3AQ59EK9 446 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 ABHD12BQ7Z5M8 362 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 RETREG3Q86VR2 466 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 HIPK4Q8NE63 616 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC38A4Q969I6 547 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 TESQ9UGI8 421 aaKnown RBP16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 NDUFAF1Q9Y375 327 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 GMEB1Q9Y692 573 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 CR1P17927 2039 aa16.9■□□□□ 0.3
CCHCR1-210ENST00000464012 PRORSD1PA6NEY8 169 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 E7EQL1 145 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 ZNF587BE7ETH6 402 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 NDUFS7O75251 213 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 CD8AP01732 235 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 CLDN17P56750 224 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 NFYCQ13952 458 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 ADRM1Q16186 407 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 HIKESHIQ53FT3 197 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 C6orf89Q6UWU4 347 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 B3GLCTQ6Y288 498 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 ARMC8Q8IUR7 673 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 EPHX4Q8IUS5 362 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 DEPDC4Q8N2C3 294 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 LSMEM1Q8N8F7 131 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 SMYD1Q8NB12 490 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 STON2Q8WXE9 905 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 RADILQ96JH8 1075 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 HS6ST2Q96MM7 605 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 PIF1Q9H611 641 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 SELENONQ9NZV5 590 aa16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 GDF2Q9UK05 429 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-210ENST00000464012 IGKV1D-42A0A075B6H8 117 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 M0R082 166 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 SERPINB7O75635 380 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 LGI1O95970 557 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 IGHV4-39P01824 125 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 OPN1SWP03999 348 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 ZNF43P17038 809 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 ACVR1BP36896 505 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 PRPS1P60891 318 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 DMTNQ08495 405 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 SF3A3Q12874 501 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 FAM69AQ5T7M9 428 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 AGAP6Q5VW22 663 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 DTX2Q86UW9 622 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 PTOV1Q86YD1 416 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 MAPK1IP1LQ8NDC0 245 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 ZNF417Q8TAU3 575 aa16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 DNAJA4Q8WW22 397 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-210ENST00000464012 TAAR8Q969N4 342 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms