RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 AKR7A3O95154 331 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 AHSA1O95433 338 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 C1QCP02747 245 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 CSF3P09919 207 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 GKN3PP0CG01 181 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 BMP2P12643 396 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 ETS2P15036 469 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 PPIBP23284 216 aaKnown RBP11.39□□□□□ -0.59
RPAIN-202ENST00000381208 FABP6P51161 128 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 MAPK11Q15759 364 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 ZNF311Q5JNZ3 666 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 C1orf140Q5VVS0 124 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 C11orf71Q6IPW1 123 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 GOLGA6L1Q8N7Z2 621 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 WDR31Q8NA23 367 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 MFSD8Q8NHS3 518 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 BBS10Q8TAM1 723 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 SPATA5L1Q9BVQ7 753 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 CACNG6Q9BXT2 260 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 TMBIM4Q9HC24 238 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 A4GALTQ9NPC4 353 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 TMEM45AQ9NWC5 275 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 PMF1-BGLAPU3KQ54 211 aa11.39□□□□□ -0.59
RPAIN-202ENST00000381208 ZNF587BE7ETH6 402 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 CLIC1O00299 241 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 POLR3GO15318 223 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-202ENST00000381208 FRS3O43559 492 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 CD5LO43866 347 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 OR2T1O43869 369 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 NPIPB7O75200 414 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 GTF2E2P29084 291 aaKnown RBP11.38□□□□□ -0.59
RPAIN-202ENST00000381208 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-202ENST00000381208 SH3BGRP55822 239 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-202ENST00000381208 CBX1P83916 185 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 GABPB1Q06547 395 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-202ENST00000381208 RGNQ15493 299 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 C3orf36Q3SXR2 165 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 GPAT4Q86UL3 456 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 PRIMA1Q86XR5 153 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 KRT73Q86Y46 540 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 ZIC4Q8N9L1 334 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 GTF2H4Q92759 462 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 C3orf49Q96BT1 292 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 C7orf26Q96N11 449 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 KCNS3Q9BQ31 491 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 EVA1AQ9H8M9 152 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 SLC6A13Q9NSD5 602 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 ADPRHL2Q9NX46 363 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 RPS6KB2Q9UBS0 482 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 FBXO9Q9UK97 447 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-202ENST00000381208 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 USH1CQ9Y6N9 552 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 ATRQ13535 2644 aa11.38□□□□□ -0.59
RPAIN-202ENST00000381208 TMEM229AB2RXF0 380 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 AKAP8O43823 692 aaKnown RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 SSX4O60224 188 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 SLC25A16P16260 332 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 PRKAR1BP31321 381 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 UBE2NP61088 152 aaKnown RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 KRTAP1-1Q07627 177 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 MFSD13AQ14CX5 517 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 CREB3L2Q70SY1 520 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 MAVSQ7Z434 540 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 NET1Q7Z628 596 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 CLIP4Q8N3C7 705 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 BHLHE22Q8NFJ8 381 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 OR10H5Q8NGA6 315 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 MAGEE2Q8TD90 523 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 DNAJA4Q8WW22 397 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 VPS33AQ96AX1 596 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 AURKBQ96GD4 344 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 ZNF385AQ96PM9 386 aaKnown RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 OR52B2Q96RD2 323 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 PAIP1Q9H074 479 aaKnown RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 TCF7L2Q9NQB0 619 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 GDF2Q9UK05 429 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 CORO2BQ9UQ03 480 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 RCE1Q9Y256 329 aa11.37□□□□□ -0.59
RPAIN-202ENST00000381208 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
RPAIN-202ENST00000381208 A0A1W2PR80 420 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 ELOA3DA6NLF2 546 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-202ENST00000381208 NDUFS7O75251 213 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 IFNA2P01563 188 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 PNMTP11086 282 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 ZNF43P17038 809 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 P2RY4P51582 365 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 EFNA4P52798 201 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 FOXG1P55316 489 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-202ENST00000381208 ELOA3BQ3SY89 546 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 GTDC1Q4AE62 458 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 AGBL2Q5U5Z8 902 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 C9orf135Q5VTT2 229 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 HMBOX1Q6NT76 420 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 C6orf89Q6UWU4 347 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms