RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 FUT1P19526 365 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 RAB1AP62820 205 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TIGITQ495A1 244 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TECRLQ5HYJ1 363 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC38A6Q8IZM9 456 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 C20orf24Q9BUV8 137 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 HEYLQ9NQ87 328 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 INTS6Q9UL03 887 aaKnown RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 CSNK1G3Q9Y6M4 447 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 LGALS8O00214 317 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SHC2P98077 582 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 H2BFWTQ7Z2G1 175 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 THNSL2Q86YJ6 484 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR2G3Q8NGZ4 309 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 IFI44Q8TCB0 444 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 NUDT22Q9BRQ3 303 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR51I2Q9H344 312 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF816-ZNF321PA0A0X1KG74 233 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 PRAMEF11O60813 436 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 DDAH2O95865 285 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 ERVFC1P60507 584 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF321PQ8N8H1 164 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR8J2Q8NGG1 315 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR51L1Q8NGJ5 315 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 F2RL3Q96RI0 385 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 ABHD6Q9BV23 337 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 ST6GALNAC4Q9H4F1 302 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC6A20Q9NP91 592 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 LRRC30A6NM36 301 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 SMLR1H3BR10 107 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 FGF3P11487 239 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 FAM26DQ5JW98 314 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 FAM57BQ71RH2 274 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 LRRC18Q8N456 261 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF623O75123 536 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF17P17021 662 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 MTCP1P56278 107 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 GALNT2Q10471 571 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF322Q6U7Q0 402 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC5A8Q8N695 610 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR9Q2Q8NGE9 314 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 DPH7Q9BTV6 452 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 C1QTNF2Q9BXJ5 285 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 DNMT3BQ9UBC3 853 aaKnown RBP12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 PHOX2AO14813 284 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 FCGR2AP12318 317 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 SPI1P17947 270 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 CASP3P42574 277 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 TEAD2Q15562 447 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 CMPK2Q5EBM0 449 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 NECAP1Q8NC96 275 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC35B2Q8TB61 432 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM200CA6NKL6 621 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 C4orf47A7E2U8 309 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 ACP2P11117 423 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 CD1DP15813 335 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 S100A11P31949 105 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 KCNQ1P51787 676 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 EPHA5P54756 1037 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 DIO3P55073 304 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 LCTLQ6UWM7 567 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 KLHDC8AQ8IYD2 350 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 ETV7Q9Y603 341 aa12.96□□□□□ -0.33
CSPG4P12-202ENST00000559989 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 BLACEA4D250 179 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 SPINT2O43291 252 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 F7P08709 466 aaPredicted RBP12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 GABRA5P31644 462 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 KHDC1LQ5JSQ8 128 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 NPSR1Q6W5P4 371 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF551Q7Z340 670 aaPredicted RBP12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 MBOAT4Q96T53 435 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC29A1Q99808 456 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 CNOT2Q9NZN8 540 aaKnown RBP12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 INSL6Q9Y581 213 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 NXPH3O95157 252 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 PDGFBP01127 241 aaPredicted RBP12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 PSMB2P49721 201 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 BAK1Q16611 211 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 TCTN2Q96GX1 697 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC16A7O60669 478 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 ABOP16442 354 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 KRTDAPP60985 99 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 PDZK1IP1Q13113 114 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 RCE1Q9Y256 329 aa12.96□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF732B4DXR9 585 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RNASEK-C17orf49H0YIS7 233 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 NRP1O14786 923 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SULT1A3P0DMM9 295 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SULT1A4P0DMN0 295 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms