RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SCIMPQ6UWF3 145 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FAM151BQ6UXP7 276 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TMPRSS11FQ6ZWK6 438 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GET4Q7L5D6 327 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HSD11B1LQ7Z5J1 315 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZER1Q7Z7L7 766 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TMPRSS11BQ86T26 416 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SETD3Q86TU7 594 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ITIH5Q86UX2 942 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SNX32Q86XE0 403 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CACUL1Q86Y37 369 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM25Q86YD3 366 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC49Q8IUZ0 686 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FUNDC1Q8IVP5 155 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF595Q8IYB9 648 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C10orf111Q8N326 155 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RYBPQ8N488 228 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RNF175Q8N4F7 328 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MINDY1Q8N5J2 469 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CLDN19Q8N6F1 224 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MRPL43Q8N983 215 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GPR26Q8NDV2 337 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OR2AP1Q8NGE2 309 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OR52B6Q8NGF0 335 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OR2A12Q8NGT7 310 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OR4L1Q8NH43 312 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 KIR2DL5BQ8NHK3 375 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C9orf43Q8TAL5 461 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FIBINQ8TAL6 211 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RDH11Q8TC12 318 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DTX3LQ8TDB6 740 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 BRSK1Q8TDC3 778 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DDI1Q8WTU0 396 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TWIST2Q8WVJ9 160 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MRPS31Q92665 395 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FGF14Q92915 247 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ESAMQ96AP7 390 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SLCO4A1Q96BD0 722 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC124Q96CT7 223 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RCN3Q96D15 328 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RMDN1Q96DB5 314 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 L3HYPDHQ96EM0 354 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C19orf60Q96EN9 201 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TMA16Q96EY4 203 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CNDP1Q96KN2 507 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TEX37Q96LM6 180 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PPP1R2P1Q96PQ5 205 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 LYSMD1Q96S90 227 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HBEGFQ99075 208 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NPAS2Q99743 824 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NRTNQ99748 197 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DDX50Q9BQ39 737 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MRPL57Q9BQC6 102 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NUDT16L1Q9BRJ7 211 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SIKE1Q9BRV8 207 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SLC39A3Q9BRY0 314 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 THTPAQ9BU02 230 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C1orf50Q9BV19 199 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ERVK-6Q9BXR3 956 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PLA2G2FQ9BZM2 168 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DERL2Q9GZP9 239 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HOXD1Q9GZZ0 328 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 WWP1Q9H0M0 922 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 LINC00597Q9H2U6 94 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MMP27Q9H306 513 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OSGEPL1Q9H4B0 414 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ACTL8Q9H568 366 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 IKZF5Q9H5V7 419 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OPA3Q9H6K4 179 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZDHHC6Q9H6R6 413 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 JPT2Q9H910 190 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 COG4Q9H9E3 785 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MEAF6Q9HAF1 191 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RNPEPL1Q9HAU8 725 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 POPDC3Q9HBV1 291 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 Q9N2K0 584 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 IL26Q9NPH9 171 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SMOXQ9NWM0 555 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NMRK1Q9NWW6 199 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 UTP6Q9NYH9 597 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GDE1Q9NZC3 331 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TXNDC16Q9P2K2 825 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NFKBIL1Q9UBC1 381 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CRNNQ9UBG3 495 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C19orf25Q9UFG5 118 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SUN2Q9UH99 717 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CIDEBQ9UHD4 219 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DCDC2Q9UHG0 476 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 BAIAP2L1Q9UHR4 511 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TRMT6Q9UJA5 497 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RIMS3Q9UJD0 308 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GNPTGQ9UJJ9 305 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PCTPQ9UKL6 214 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 STUB1Q9UNE7 303 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HS3ST2Q9Y278 367 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 BTRCQ9Y297 605 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ACOT9Q9Y305 439 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FIS1Q9Y3D6 152 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 POLR3HQ9Y535 204 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms