RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 HIST3H2AQ7L7L0 130 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 YRDCQ86U90 279 aaKnown RBP9.7□□□□□ -0.86
SP140-208ENST00000473711 TCEANCQ8N8B7 351 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 MDS2Q8NDY4 140 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 BPIFB6Q8NFQ5 453 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 OR2M7Q8NG81 312 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 OR52L1Q8NGH7 329 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 MOSPD2Q8NHP6 518 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 APH1BQ8WW43 257 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 LIPHQ8WWY8 451 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 HDAC2Q92769 488 aaKnown RBP9.7□□□□□ -0.86
SP140-208ENST00000473711 HAS2Q92819 552 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 HIST1H2ACQ93077 130 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 ZBTB8AQ96BR9 441 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 DDIT4LQ96D03 193 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
SP140-208ENST00000473711 FAM173AQ9BQD7 235 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 PTDSS2Q9BVG9 487 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 IFT27Q9BW83 186 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 YTHDF1Q9BYJ9 559 aaKnown RBP9.7□□□□□ -0.86
SP140-208ENST00000473711 UBQLN3Q9H347 655 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
SP140-208ENST00000473711 TMEM185BQ9H7F4 350 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 BOKQ9UMX3 212 aaPredicted RBP9.7□□□□□ -0.86
SP140-208ENST00000473711 EML6Q6ZMW3 1958 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 CEP250Q9BV73 2442 aa9.7□□□□□ -0.86
SP140-208ENST00000473711 H3BML4 177 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 CDK2AP1O14519 115 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 ZNF208O43345 1280 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 TLX2O43763 284 aaPredicted RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 XPNPEP2O43895 674 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 PRKYO43930 277 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 WBP4O75554 376 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 TRAPPC6AO75865 159 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 NDUFB2O95178 105 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 PPP1R3DO95685 299 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 HMGN1P05114 100 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 PEPDP12955 493 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 GABRB1P18505 474 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 ADH6P28332 368 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 GRPRP30550 384 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 SRD5A2P31213 254 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 SLC6A6P31641 620 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 RFC3P40938 356 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 EIF2S3P41091 472 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 AQP2P41181 271 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 PCYT1AP49585 367 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 CDH15P55291 814 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 FOXO1Q12778 655 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 SMN1Q16637 294 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 PGGHGQ32M88 737 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 RBM48Q5RL73 367 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 SLC35F1Q5T1Q4 408 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 FAM69AQ5T7M9 428 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 TMEM154Q6P9G4 183 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 C5orf46Q6UWT4 87 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 CCDC81Q6ZN84 652 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 MAMDC2Q7Z304 686 aaPredicted RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 GALNTL5Q7Z4T8 443 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 IGFN1Q86VF2 1251 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 CCDC103Q8IW40 242 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 SPACA3Q8IXA5 215 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 GTPBP8Q8N3Z3 284 aaPredicted RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 OR2T33Q8NG76 320 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 ARL5BQ96KC2 179 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 C5orf34Q96MH7 638 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 SLC38A2Q96QD8 506 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 TEX12Q9BXU0 123 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 POTEKPQ9BYX7 375 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 RNF32Q9H0A6 362 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 ZNF696Q9H7X3 374 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 FKRPQ9H9S5 495 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 ZFP64Q9NPA5 681 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 CLN6Q9NWW5 311 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 ZNF229Q9UJW7 825 aa9.69□□□□□ -0.86
SP140-208ENST00000473711 RALYQ9UKM9 306 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
SP140-208ENST00000473711 MED13Q9UHV7 2174 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 OR2M5A3KFT3 312 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 MCIDASD6RGH6 385 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 PTGES3LE9PB15 166 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 SLC1A7O00341 560 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 BHLHE40O14503 412 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 OR2T1O43869 369 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 NME2P1O60361 137 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 MPZL2O60487 215 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 FAM20BO75063 409 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 CEACAM4O75871 244 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 SLC2A10O95528 541 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 MT-ATP6P00846 226 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 ASAH2BP0C7U1 165 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 IMPDH2P12268 514 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 NME2P22392 152 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 EEF1B2P24534 225 aaKnown RBP9.68□□□□□ -0.86
SP140-208ENST00000473711 GDF1P27539 372 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 SHC1P29353 583 aa9.68□□□□□ -0.86
SP140-208ENST00000473711 GRK5P34947 590 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms