RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KCNK9Q9NPC2 374 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 SLC6A13Q9NSD5 602 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 TFPTP0C1Z6 253 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 GKN3PP0CG01 181 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 BMP4P12644 408 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 CXCR1P25024 350 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 P2RY4P51582 365 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 EFNA4P52798 201 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 OR7A5Q15622 319 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 SWI5Q1ZZU3 235 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 MST1LQ2TV78 715 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF836Q6ZNA1 936 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 VRK2Q86Y07 508 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 OR52P1PQ8NH57 321 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 C10orf105Q8TEF2 133 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 FAM168AQ92567 244 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 PROX1Q92786 737 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 ZBTB18Q99592 522 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 WDR55Q9H6Y2 383 aaPredicted RBP14□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM160Q9NX00 188 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 NOL12Q9UGY1 213 aaKnown RBP eCLIP14□□□□□ -0.17
CKS1B-202ENST00000368436 PMF1-BGLAPU3KQ54 211 aa14□□□□□ -0.17
CKS1B-202ENST00000368436 V9GYY5 206 aaPredicted RBP14□□□□□ -0.17
CKS1B-202ENST00000368436 RNF212BA8MTL3 300 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 A8MVM7 634 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 RFXANKO14593 260 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 HDAC3O15379 428 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 SNNO75324 88 aaPredicted RBP13.99□□□□□ -0.17
CKS1B-202ENST00000368436 WNT11O96014 354 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 F12P00748 615 aaPredicted RBP13.99□□□□□ -0.17
CKS1B-202ENST00000368436 IL6P05231 212 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 CSF3P09919 207 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 ZCCHC18P0CG32 403 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 EPHA3P29320 983 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 ZSWIM7Q19AV6 140 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 LIN52Q52LA3 116 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 PDCD4Q53EL6 469 aaKnown RBP13.99□□□□□ -0.17
CKS1B-202ENST00000368436 CEP85LQ5SZL2 805 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 RNF220Q5VTB9 566 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 WBP2NLQ6ICG8 309 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 NANOS1Q8WY41 292 aaKnown RBP13.99□□□□□ -0.17
CKS1B-202ENST00000368436 AURKBQ96GD4 344 aaPredicted RBP13.99□□□□□ -0.17
CKS1B-202ENST00000368436 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
CKS1B-202ENST00000368436 PARD6BQ9BYG5 372 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 CENPHQ9H3R5 247 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 OBP2BQ9NPH6 170 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 CALML5Q9NZT1 146 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 P2RX2Q9UBL9 471 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 MOKQ9UQ07 419 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 CHST2Q9Y4C5 530 aa13.99□□□□□ -0.17
CKS1B-202ENST00000368436 TRPC5OSA6NMA1 111 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 ATP6V1G2-DDX39BF2Z307 99 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 NPIPB7O75200 414 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 VAMP5O95183 116 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 FAM157CP0CG43 387 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 ETFAP13804 333 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 PAX7P23759 505 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 WDR4P57081 412 aaKnown RBP13.98□□□□□ -0.17
CKS1B-202ENST00000368436 COPZ1P61923 177 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 BNIP2Q12982 314 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 HIKESHIQ53FT3 197 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 HHATQ5VTY9 493 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM225Q6GV28 225 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 KLHL24Q6TFL4 600 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 CREB3L2Q70SY1 520 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 ABHD12BQ7Z5M8 362 aaPredicted RBP13.98□□□□□ -0.17
CKS1B-202ENST00000368436 GPAT4Q86UL3 456 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 PHC2Q8IXK0 858 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 SLC38A5Q8WUX1 472 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 MAELQ96JY0 434 aaKnown RBP13.98□□□□□ -0.17
CKS1B-202ENST00000368436 PAIP2Q9BPZ3 127 aaKnown RBP13.98□□□□□ -0.17
CKS1B-202ENST00000368436 MANSC1Q9H8J5 431 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 THAP1Q9NVV9 213 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM45AQ9NWC5 275 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF443Q9Y2A4 671 aaPredicted RBP13.98□□□□□ -0.17
CKS1B-202ENST00000368436 IGHV1-18A0A0C4DH31 117 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 KLF11O14901 512 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 FRS3O43559 492 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 SLC22A3O75751 556 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 BCHEP06276 602 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 PRG2P13727 222 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 IDO1P14902 403 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 CDH2P19022 906 aaPredicted RBP13.97□□□□□ -0.17
CKS1B-202ENST00000368436 CRISP3P54108 245 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 DSTNP60981 165 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 CROCCP2Q86T23 111 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 EPHX4Q8IUS5 362 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 CLIP4Q8N3C7 705 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 CADM2Q8N3J6 435 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 OR1K1Q8NGR3 316 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 KCNK17Q96T54 332 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 SPATA9Q9BWV2 254 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 TAPBPLQ9BX59 468 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 TPT1P8Q9HAU6 139 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 ADPRHL2Q9NX46 363 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 RAB21Q9UL25 225 aa13.97□□□□□ -0.17
CKS1B-202ENST00000368436 A0A096LPI6 279 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 A0A0G2JPF8 293 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 OR6C65A6NJZ3 312 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms