RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FBXO46Q6PJ61 603 aaPredicted RBP12.73□□□□□ -0.37
VCP-201ENST00000358901 TMEM64Q6YI46 380 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 COX15Q7KZN9 410 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 ZBP1Q9H171 429 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 SEMA4GQ9NTN9 838 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 PTTG3PQ9NZH4 202 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 NPAP1Q9NZP6 1156 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 FBXL2Q9UKC9 423 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 EDARQ9UNE0 448 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 LAMB1P07942 1786 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 DNAJB6O75190 326 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 VEGFCP49767 419 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
VCP-201ENST00000358901 GALEQ14376 348 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 OR6V1Q8N148 313 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 SLC25A46Q96AG3 418 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 CDCA4Q9BXL8 241 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
VCP-201ENST00000358901 FN3KQ9H479 309 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 PLEKHJ1Q9NW61 149 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 ZNF225Q9UK10 706 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 LGI1O95970 557 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 PDCD1LG2Q9BQ51 273 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 TMEM129A0AVI4 362 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 SULT2B1O00204 365 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 HMGN4O00479 90 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 TACR3P29371 465 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 MEF2DQ14814 521 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 OPCMLQ14982 345 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 METRNLQ641Q3 311 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 TMPPEQ6ZT21 453 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 FCRL1Q96LA6 429 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 GABARAPL3Q9BY60 117 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 P04436 131 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 ZNF35P13682 527 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 GPR157Q5UAW9 335 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 RTL10Q7L3V2 364 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 CCDC86Q9H6F5 360 aaKnown RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 SLC6A20Q9NP91 592 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 CIB4A0PJX0 185 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 SERINC4A6NH21 518 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 B4GALT3O60512 393 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 RBMS2Q15434 407 aaKnown RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 DUSP5Q16690 384 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 NDUFAF7Q7L592 441 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 NXPE3Q969Y0 559 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 KIAA1143Q96AT1 154 aaPredicted RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 SEC22AQ96IW7 307 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 HHIPQ96QV1 700 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 PBDC1Q9BVG4 233 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 GABARAPL1Q9H0R8 117 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 ZNF175Q9Y473 711 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 TRABD2BA6NFA1 517 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 ZNF593O00488 134 aaPredicted RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 RAB38P57729 211 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 Q499Y3 187 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 OR14L1PQ8NHC6 308 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 RRNAD1Q96FB5 475 aaKnown RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
VCP-201ENST00000358901 HINT3Q9NQE9 182 aaKnown RBP12.72□□□□□ -0.37
VCP-201ENST00000358901 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 A0A1W2PR48 441 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 PRICKLE3O43900 615 aaPredicted RBP12.71□□□□□ -0.37
VCP-201ENST00000358901 FZD6O60353 706 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 TAS2R31P59538 309 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 ACY1Q03154 408 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 TRMT12Q53H54 448 aaKnown RBP12.71□□□□□ -0.37
VCP-201ENST00000358901 ZNF529Q6P280 563 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 ZNF595Q8IYB9 648 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 ZNF566Q969W8 418 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 ANKRD19PQ9H560 264 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 SLC6A13Q9NSD5 602 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 GGT3PA6NGU5 568 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 TP53P04637 393 aaPredicted RBP12.71□□□□□ -0.37
VCP-201ENST00000358901 HOXB5P09067 269 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 PIPP12273 146 aaPredicted RBP12.71□□□□□ -0.37
VCP-201ENST00000358901 ZP2Q05996 745 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 IDO2Q6ZQW0 420 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 PM20D2Q8IYS1 436 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 Q96M85 177 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 TEAD3Q99594 435 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 LMAN1LQ9HAT1 526 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.37
VCP-201ENST00000358901 TRBV5-4A0A0C4DH59 114 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 TMEM82A0PJX8 343 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 FCMRO60667 390 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.38
VCP-201ENST00000358901 CDK2P24941 298 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms