RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 METTL27Q8N6F8 245 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-216ENST00000610401 MICU1Q9BPX6 476 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 SRA1Q9HD15 236 aaKnown RBP18.8■□□□□ 0.6
SSBP3-216ENST00000610401 EMC7Q9NPA0 242 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 FLRT3Q9NZU0 649 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 SLC35A3Q9Y2D2 325 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 UBL3O95164 117 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 FAM53BQ14153 422 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 DGAT2L6Q6ZPD8 337 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF765Q7L2R6 523 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ASPGQ86U10 573 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ETFBKMTQ8IXQ9 262 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 OR11G2Q8NGC1 345 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 OR2L8Q8NGY9 312 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ADAMTS14Q8WXS8 1223 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 OR2M2Q96R28 347 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM27Q9HBJ8 222 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 FKBP7Q9Y680 259 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 C7orf66A4D0T2 115 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 TVP23AA6NH52 213 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 B8ZZF3 427 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 TRA2BP62995 288 aaKnown RBP18.79■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM52BQ4KMG9 183 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 CD276Q5ZPR3 534 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF613Q6PF04 617 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ZBTB44Q8NCP5 570 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 AHCYL2Q96HN2 611 aaKnown RBP18.79■□□□□ 0.6
SSBP3-216ENST00000610401 LINC00052Q96N35 136 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 HRASLSQ9HDD0 168 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 MED17Q9NVC6 651 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 CELSR3Q9NYQ7 3312 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 CDK2AP1O14519 115 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 OR8G3PP0DMU2 310 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 GBX2P52951 348 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-216ENST00000610401 SIRPAP78324 504 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF782Q6ZMW2 699 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-216ENST00000610401 SORCS2Q96PQ0 1159 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 IGFLR1Q9H665 355 aa18.79■□□□□ 0.6
SSBP3-216ENST00000610401 H0YC42 278 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 PSMA6P60900 246 aaKnown RBP18.78■□□□□ 0.6
SSBP3-216ENST00000610401 LINC00303Q3SY05 128 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 SYNPRQ8TBG9 265 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 DVL3Q92997 716 aaPredicted RBP18.78■□□□□ 0.6
SSBP3-216ENST00000610401 NOX3Q9HBY0 568 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM138Q9NPI0 162 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 C12orf4Q9NQ89 552 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 C2orf42Q9NWW7 574 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 L7N2F9 121 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 CENPAP49450 140 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 NRG3P56975 720 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM44Q2T9K0 475 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 FBXO42Q6P3S6 717 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 SRFBP1Q8NEF9 429 aaKnown RBP18.78■□□□□ 0.6
SSBP3-216ENST00000610401 C10orf90Q96M02 699 aa18.78■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF223Q9UK11 482 aaPredicted RBP18.78■□□□□ 0.6
SSBP3-216ENST00000610401 PEX14O75381 377 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 PPP1CAP62136 330 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 TFF2Q03403 129 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 RIN1Q13671 783 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 OPCMLQ14982 345 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 PRRT3Q5FWE3 981 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM69Q5SWH9 247 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 GPR139Q6DWJ6 353 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 GPALPP1Q8IXQ4 340 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF619Q8N2I2 560 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 WFIKKN2Q8TEU8 576 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 UBL7Q96S82 380 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-216ENST00000610401 TRPV4Q9HBA0 871 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 IKZF2Q9UKS7 526 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 MAB21L2Q9Y586 359 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 LOC100509620A0A075B734 347 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 RPS10-NUDT3A0A1W2PQS6 291 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 KAT7O95251 611 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 LIPCP11150 499 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 SRMP19623 302 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 TLX1P31314 330 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-216ENST00000610401 CCR9P51686 369 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 ACSM1Q08AH1 577 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 DMKNQ6E0U4 476 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-216ENST00000610401 TANGO2Q6ICL3 276 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 HEPHL1Q6MZM0 1159 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 C11orf88Q6PI97 169 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 BRIX1Q8TDN6 353 aaKnown RBP18.77■□□□□ 0.6
SSBP3-216ENST00000610401 STON1Q9Y6Q2 735 aa18.77■□□□□ 0.6
SSBP3-216ENST00000610401 OR6C74A6NCV1 312 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 CACNB4O00305 520 aaPredicted RBP18.77■□□□□ 0.59
SSBP3-216ENST00000610401 OR10H2O60403 315 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 KDM4BO94953 1096 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 F13BP05160 661 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 NID1P14543 1247 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 FNTBP49356 437 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 OR5M1Q8NGP8 315 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 ZDHHC1Q8WTX9 485 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 FGF13Q92913 245 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 ST6GALNAC2Q9UJ37 374 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 PCDHGA5Q9Y5G8 931 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 MPDZO75970 2070 aa18.77■□□□□ 0.59
SSBP3-216ENST00000610401 HCRTR1O43613 425 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 B3GALT2O43825 422 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 CSN2P05814 226 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms