RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 RAC1P63000 192 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SPIBQ01892 262 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SRYQ05066 204 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 DGCR6Q14129 220 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GK3PQ14409 553 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 OR1Q1Q15612 314 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 TOMM34Q15785 309 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 C3AR1Q16581 482 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 EIF2S3LQ2VIR3 472 aaKnown RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SLC36A3Q495N2 470 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GXYLT1Q4G148 440 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 C4orf17Q53FE4 359 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 DCST1Q5T197 706 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 PDSS1Q5T2R2 415 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 C1QL3Q5VWW1 255 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 PODNL1Q6PEZ8 512 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 POMZP3Q6PJE2 187 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 LINC00114Q6XXX2 140 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 PLEKHM3Q6ZWE6 761 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 USP51Q70EK9 711 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GDF7Q7Z4P5 450 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 NKAIN4Q8IVV8 208 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 UBQLNLQ8IYU4 475 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SLC7A13Q8TCU3 470 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GIPC3Q8TF64 312 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 PRRC1Q96M27 445 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 FEVQ99581 238 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GPA33Q99795 319 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF559Q9BR84 538 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 TRIM2Q9C040 744 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 TMEM185BQ9H7F4 350 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 CTPS2Q9NRF8 586 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 PAQR5Q9NXK6 330 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 ALKBH4Q9NXW9 302 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 CHRNA9Q9UGM1 479 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 RAB26Q9ULW5 256 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF337Q9Y3M9 751 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 FAM32AQ9Y421 112 aaKnown RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 HEATR5AQ86XA9 2040 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 A0A087WUU8 490 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 CPSF4LA6NMK7 179 aaKnown RBP9.82□□□□□ -0.84
SHMT2-218ENST00000555213 E9PLN8 166 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 PYCARD-AS1I3L0S3 204 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 CCL21O00585 134 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 EIF1AYO14602 144 aaKnown RBP9.82□□□□□ -0.84
SHMT2-218ENST00000555213 FMO6PO60774 539 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 E2F6O75461 281 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 OR5F1O95221 314 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 TP53P04637 393 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-218ENST00000555213 ACADSP16219 412 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 EPHA2P29317 976 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 TACR3P29371 465 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 STARP49675 285 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 DLX5P56178 289 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 CLDN18P56856 261 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 TAF11Q15544 211 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 ZIK1Q3SY52 487 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-218ENST00000555213 C1orf185Q5T7R7 199 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 TMEM211Q6ICI0 200 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 B3GNT6Q6ZMB0 384 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 WDR88Q6ZMY6 472 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 ESPNLQ6ZVH7 1005 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 ZER1Q7Z7L7 766 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 DOLPP1Q86YN1 238 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 OFCC1Q8IZS5 231 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 LSMEM1Q8N8F7 131 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 POC1BQ8TC44 478 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 ADAMTS16Q8TE57 1224 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 WDYHV1Q96HA8 205 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 KLHL15Q96M94 604 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 NIPSNAP1Q9BPW8 284 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 RBM4BQ9BQ04 359 aaKnown RBP9.82□□□□□ -0.84
SHMT2-218ENST00000555213 VKORC1Q9BQB6 163 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 RBM4Q9BWF3 364 aaKnown RBP9.82□□□□□ -0.84
SHMT2-218ENST00000555213 TMEM27Q9HBJ8 222 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 TIGARQ9NQ88 270 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 SLC5A6Q9Y289 635 aa9.82□□□□□ -0.84
SHMT2-218ENST00000555213 ARRDC5A6NEK1 342 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ELOA3DA6NLF2 546 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ZNHIT1O43257 154 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 LRRTM2O43300 516 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 GNAO1P09471 354 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 TFPIP10646 304 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 PNMTP11086 282 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 FCGR2AP12318 317 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 CXCR1P25024 350 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 IFNA8P32881 189 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 SFTPDP35247 375 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 EIF1AXP47813 144 aaKnown RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 FOXD4Q12950 439 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 SGCBQ16585 318 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ELOA3BQ3SY89 546 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ACSF3Q4G176 576 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 SWT1Q5T5J6 900 aaKnown RBP9.81□□□□□ -0.84
SHMT2-218ENST00000555213 HBMQ6B0K9 141 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 ULK3Q6PHR2 472 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 C3P1Q6ZMU1 363 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 FJX1Q86VR8 437 aa9.81□□□□□ -0.84
SHMT2-218ENST00000555213 MARVELD2Q8N4S9 558 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms